(Q38148962)

29 August 2017

Function of lncRNAs and approaches to lncRNA-protein interactions (English)

1 reference

29 August 2017

0 references

Hanjiang Fu

2

0 references

author name string

Juanjuan Zhu

series ordinal

1

1 reference

29 August 2017

Yongge Wu

series ordinal

3

1 reference

29 August 2017

Xiaofei Zheng

series ordinal

4

1 reference

29 August 2017

5 October 2013

1 reference

Science in China. Series C: Life Sciences

29 August 2017

1 reference

29 August 2017

56

1 reference

29 August 2017

876-885

1 reference

29 August 2017

10

1 reference

https://scigraph.springernature.com/pub.10.1007/s11427-013-4553-6

29 August 2017

0 references

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 January 2018

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RNA maps reveal new RNA classes and a possible function for pervasive transcription

21 January 2018

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The transcriptional landscape of the mammalian genome

21 January 2018

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The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation

21 January 2018

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Long noncoding RNAs with enhancer-like function in human cells

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Extensive and coordinated transcription of noncoding RNAs within cell-cycle promoters

21 January 2018

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A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response

21 January 2018

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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

21 January 2018

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Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA.

21 January 2018

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Transcriptomic and genomic analysis of human hepatocellular carcinomas and hepatoblastomas

21 January 2018

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A large noncoding RNA is a marker for murine hepatocellular carcinomas and a spectrum of human carcinomas

21 January 2018

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Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

21 January 2018

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CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancer

21 January 2018

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GAS5, a non-protein-coding RNA, controls apoptosis and is downregulated in breast cancer

21 January 2018

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Hypermethylation of the promoter region is associated with the loss of MEG3 gene expression in human pituitary tumors

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Maternally expressed gene 3 (MEG3) noncoding ribonucleic acid: isoform structure, expression, and functions

21 January 2018

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Activation of p53 by MEG3 non-coding RNA

21 January 2018

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Characterization of a germ-line deletion, including the entire INK4/ARF locus, in a melanoma-neural system tumor family: identification of ANRIL, an antisense noncoding RNA whose expression coclusters with ARF.

21 January 2018

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A common allele on chromosome 9 associated with coronary heart disease

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long non-coding RNAs in Huntington's disease neurodegeneration

21 January 2018

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The long and the short of noncoding RNAs

21 January 2018

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Non-coding, mRNA-like RNAs database Y2K.

21 January 2018

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NRED: a database of long noncoding RNA expression

21 January 2018

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The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

lncRNAdb: a reference database for long noncoding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

ncFANs: a web server for functional annotation of long non-coding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

NONCODE v3.0: integrative annotation of long noncoding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

RNAdb--a comprehensive mammalian noncoding RNA database

21 January 2018

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RNAdb 2.0--an expanded database of mammalian non-coding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Rfam: an RNA family database

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Rfam: annotating non-coding RNAs in complete genomes

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

LncRNADisease: a database for long-non-coding RNA-associated diseases.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

LNCipedia: a database for annotated human lncRNA transcript sequences and structures

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Evolution and functions of long noncoding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long non-coding RNAs: insights into functions

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Specific expression of long noncoding RNAs in the mouse brain

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Differentiating protein-coding and noncoding RNA: challenges and ambiguities

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Structural insights into RNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Distinct RNA motifs are important for coactivation of steroid hormone receptors by steroid receptor RNA activator (SRA).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Considerations in the identification of functional RNA structural elements in genomic alignments

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Mfold web server for nucleic acid folding and hybridization prediction

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CompaRNA: a server for continuous benchmarking of automated methods for RNA secondary structure prediction

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Noncoding RNAs in the mammalian central nervous system.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Modular regulatory principles of large non-coding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Transcriptional noise and the fidelity of initiation by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding RNA as modular scaffold of histone modification complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

H19 and Igf2--enhancing the confusion?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

A functional role for Tsix transcription in blocking Xist RNA accumulation but not in X-chromosome choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Human sat III and Drosophila hsr omega transcripts: a common paradigm for regulation of nuclear RNA processing in stressed cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding RNA MALAT1 controls cell cycle progression by regulating the expression of oncogenic transcription factor B-MYB.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding RNAs associated with liver regeneration 1 accelerates hepatocyte proliferation during liver regeneration by activating Wnt/β-catenin signaling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Control of somatic tissue differentiation by the long non-coding RNA TINCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The product of the H19 gene may function as an RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Tsix, a gene antisense to Xist at the X-inactivation centre

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

A Pituitary-Derived MEG3 Isoform Functions as a Growth Suppressor in Tumor Cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Transcribed-Ultra Conserved Region expression is associated with outcome in high-risk neuroblastoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

LincRNA-p21 suppresses target mRNA translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Activated GTPase movement on an RNA scaffold drives co-translational protein targeting

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Braveheart, a long noncoding RNA required for cardiovascular lineage commitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding RNAs regulate adipogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Circular RNAs are a large class of animal RNAs with regulatory potency

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

lncRNA-dependent mechanisms of androgen-receptor-regulated gene activation programs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The functional role of long non-coding RNA in human carcinomas

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Noncoding RNA genes in dosage compensation and imprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Deciphering the cancer imprintome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Genomic imprinting syndromes and cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Parental imprinting of the mouse H19 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The H19 locus: role of an imprinted non-coding RNA in growth and development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CTCF maintains differential methylation at the Igf2/H19 locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Chromosomal silencing and localization are mediated by different domains of Xist RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Imprinting along the Kcnq1 domain on mouse chromosome 7 involves repressive histone methylation and recruitment of Polycomb group complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Phosphorylation of the PRC2 component Ezh2 is cell cycle-regulated and up-regulates its binding to ncRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The non-coding Air RNA is required for silencing autosomal imprinted genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Two distinct mechanisms of silencing by the KvDMR1 imprinting control region

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Overexpression of LSD1 contributes to human carcinogenesis through chromatin regulation in various cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Genes specifically expressed at growth arrest of mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Human long non-coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Detection of long non-coding RNA in archival tissue: correlation with polycomb protein expression in primary and metastatic breast carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Long noncoding RNA high expression in hepatocellular carcinoma facilitates tumor growth through enhancer of zeste homolog 2 in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Genome-wide analysis of long noncoding RNA expression in peripheral blood mononuclear cells of uremia patients

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

A spatial dissection of the Arabidopsis floral transcriptome by MPSS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

RNA-Seq analyses generate comprehensive transcriptomic landscape and reveal complex transcript patterns in hepatocellular carcinoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Clusters of internally primed transcripts reveal novel long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

High resolution detection of DNA–RNA hybrids in situ by indirect immunofluorescence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

On the road to reading the RNA-interference code

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The non-coding RNA gadd7 is a regulator of lipid-induced oxidative and endoplasmic reticulum stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Combined RNAi and localization for functionally dissecting long noncoding RNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

LNA: a versatile tool for therapeutics and genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Locked nucleic acids (LNAs) reveal sequence requirements and kinetics of Xist RNA localization to the X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

RIP-Chip analysis: RNA-Binding Protein Immunoprecipitation-Microarray (Chip) Profiling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Genome-wide identification of polycomb-associated RNAs by RIP-seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The genomic binding sites of a noncoding RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Imaging individual mRNA molecules using multiple singly labeled probes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

The 5′-terminal sequence of U1 RNA complementary to the consensus 5′ splice site of hnRNA is single-stranded in intact U1 snRNP particles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Telomerase RNAs of different ciliates have a common secondary structure and a permuted template

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CLIP: crosslinking and immunoprecipitation of in vivo RNA targets of RNA-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CLIP: a method for identifying protein-RNA interaction sites in living cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CLIP identifies Nova-regulated RNA networks in the brain

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Feed-forward regulation of a cell fate determinant by an RNA-binding protein generates asymmetry in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

CLIPZ: a database and analysis environment for experimentally determined binding sites of RNA-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Large-scale prediction of long non-coding RNA functions in a coding-non-coding gene co-expression network

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

Predicting protein associations with long noncoding RNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

doRiNA: a database of RNA interactions in post-transcriptional regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

RNA Immunoprecipitation to Determine RNA-Protein Associations In Vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-013-4553-6

10.1007/S11427-013-4553-6

21 January 2018

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DOI

1 reference

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29 August 2017

0 references

1 reference