(Q38438226)

3 September 2017

Automatic query generation using word embeddings for retrieving passages describing experimental methods (English)

1 reference

3 September 2017

1 reference

1 reference

3

Arzucan Özgür

1 reference

3 September 2017

Ferhat Aydın

1

1 reference

PMC publication ID

5225401

3 September 2017

Zehra Melce Hüsünbeyi

series ordinal

2

1 reference

3 September 2017

10 January 2017

1 reference

3 September 2017

1 reference

3 September 2017

2017

1 reference

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.

3 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Development and application of an interaction network ontology for literature mining of vaccine-associated gene-gene interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

The BioGRID interaction database: 2015 update

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

BioC: a minimalist approach to interoperability for biomedical text processing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Detection of interaction articles and experimental methods in biomedical literature

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Detecting experimental techniques and selecting relevant documents for protein-protein interactions from biomedical literature

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Overview of the BioCreative III Workshop

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Mining of vaccine-associated IFN-γ gene interaction networks using the Vaccine Ontology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

A comprehensive benchmark of kernel methods to extract protein-protein interactions from literature

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Overview of the protein-protein interaction annotation extraction task of BioCreative II

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

OntoGene in BioCreative II

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

The DEAD-box helicase DDX3X is a critical component of the TANK-binding kinase 1-dependent innate immune response

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Broadening the horizon--level 2.5 of the HUPO-PSI format for molecular interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Manual curation is not sufficient for annotation of genomic databases

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

MINT: the Molecular INTeraction database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Nuclear import of the transcription factor SHOOT MERISTEMLESS depends on heterodimerization with BLH proteins expressed in discrete sub-domains of the shoot apical meristem of Arabidopsis thaliana

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Overview of BioCreAtIvE: critical assessment of information extraction for biology

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

IntAct: an open source molecular interaction database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

BIND: the Biomolecular Interaction Network Database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Protein-protein interactions: methods for detection and analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Agreement, the f-measure, and reliability in information retrieval

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

Supervised and traditional term weighting methods for automatic text categorization.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5225401

GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function

31 August 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW166

The G protein-coupled receptors in the pufferfish Takifugu rubripes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW166

A protein-dependent side-chain rotamer library.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW166

Developing a Robust Part-of-Speech Tagger for Biomedical Text

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FDATABASE%2FBAW166

21 January 2018

Identifiers

DOI

10.1093/DATABASE/BAW166

1 reference

3 September 2017

journals/biodb/AydinHO17

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

5225401

3 September 2017

PubMed publication ID

28077568

1 reference

PMC publication ID

5225401