(Q41473480)

1 October 2017

title

Multilocus species tree analyses resolve the ancient radiation of the subtribe Zizaniinae (Poaceae). (English)

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1 October 2017

1 reference

Liang Tang

1

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1 October 2017

Xin-hui Zou

series ordinal

2

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1 October 2017

Lin-bin Zhang

series ordinal

3

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1 October 2017

Song Ge

series ordinal

4

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1 October 2017

publication date

3 February 2015

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Molecular Phylogenetics and Evolution

1 October 2017

published in

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1 October 2017

volume

84

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1 October 2017

page(s)

232-239

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Genome size is not correlated with effective population size in the Oryza species

1 October 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Species tree of a recent radiation: the subfamily Delphininae (Cetacea, Mammalia).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Multilocus phylogenetics of a rapid radiation in the genus Thomomys (Rodentia: Geomyidae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

The age and diversification of the angiosperms re-revisited

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Species trees from highly incongruent gene trees in rice.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Darwin's abominable mystery: Insights from a supertree of the angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

The supermatrix approach to systematics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Discordance of species trees with their most likely gene trees.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Gene tree discordance, phylogenetic inference and the multispecies coalescent

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Phylogenomics and the reconstruction of the tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Another look at the root of the angiosperms reveals a familiar tale

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Bayesian phylogenetics with BEAUti and the BEAST 1.7

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

A phylogeny of the rice tribe Oryzeae (Poaceae) based on matK sequence data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Molecular phylogeny of Oryzeae (Poaceae) based on DNA sequences from chloroplast, mitochondrial, and nuclear genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Bayesian inference of species trees from multilocus data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Application of phylogenetic networks in evolutionary studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Fifteen million years of evolution in the Oryza genus shows extensive gene family expansion

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Archeological evidence for utilizaton of wild rice

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

The Evolutionary History of Ehrhartoideae, Oryzeae, and Oryza

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Inconsistency of phylogenetic estimates from concatenated data under coalescence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

The influence of gene flow on species tree estimation: a simulation study

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

A species tree for the Australo-Papuan Fairy-wrens and allies (Aves: Maluridae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

BEST: Bayesian estimation of species trees under the coalescent model.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Estimating species phylogenies using coalescence times among sequences.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Gene Trees in Species Trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Inferring phylogeny despite incomplete lineage sorting

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

A Taxonomic Revision of Luziola (Poaceae: Oryzeae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Using plastid genome-scale data to resolve enigmatic relationships among basal angiosperms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Computational approaches to species phylogeny inference and gene tree reconciliation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

T-Coffee: A novel method for fast and accurate multiple sequence alignment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Gene discordance in phylogenomics of recent plant radiations, an example from Hawaiian Cyrtandra (Gesneriaceae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Widespread Discordance of Gene Trees with Species Tree in Drosophila: Evidence for Incomplete Lineage Sorting

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Rapid diversification of a species-rich genus of neotropical rain forest trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Bushes in the tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Inferring ancient divergences requires genes with strong phylogenetic signals.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

STRAW: Species TRee Analysis Web server

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Phylogeny and biogeography of the rice tribe (Oryzeae): evidence from combined analysis of 20 chloroplast fragments.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Epidermal features and spikelet micromorphology in Oryza and related genera (Poaceae: Oryzeae)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Phylogeny of iguanian lizards inferred from 29 nuclear loci, and a comparison of concatenated and species-tree approaches for an ancient, rapid radiation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Rosid radiation and the rapid rise of angiosperm-dominated forests

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Concatenation and concordance in the reconstruction of mouse lemur phylogeny: an empirical demonstration of the effect of allele sampling in phylogenetics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Deciphering ancient rapid radiations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Coalescent versus concatenation methods and the placement of Amborella as sister to water lilies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

DAMBE5: a comprehensive software package for data analysis in molecular biology and evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

A preliminary study on population genetic structure and phylogeography of the wild and cultivated Zizania latifolia (Poaceae) based on Adh1a sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Phylogeny and biogeography of the eastern Asian-North American disjunct wild-rice genus (Zizania L., Poaceae).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Evolutionary rate patterns of the Gibberellin pathway genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Phylogenetic study of Oryzoideae species and related taxa of the Poaceae based on atpB-rbcL and ndhF DNA sequences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Multilocus analysis of nucleotide variation and speciation in Oryza officinalis and its close relatives

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Origin of land plants using the multispecies coalescent model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Analysis of 142 genes resolves the rapid diversification of the rice genus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

Multilocus estimation of divergence times and ancestral effective population sizes of Oryza species and implications for the rapid diversification of the genus.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2015.01.011

10.1016/J.YMPEV.2015.01.011

7 January 2021

Identifiers

DOI

1 reference

1 October 2017

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