(Q42177844)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25466308%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

Integration of genomic and proteomic analyses in the classification of the Siphoviridae family (English)

1 reference

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24 February 2020

Siphoviridae

1 reference

7

1 reference

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24 February 2020

Andrew M. Kropinski

8

1 reference

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24 February 2020

Evelien M. Adriaenssens

1

1 reference

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24 February 2020

Robert A Edwards

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25466308%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

John Nash

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25466308%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

5

Donald Seto

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25466308%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

author name string

Padmanabhan Mahadevan

4

1 reference

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24 February 2020

Hans-Wolfgang Ackermann

6

1 reference

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24 February 2020

language of work or name

English

0 references

publication date

14 November 2014

1 reference

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24 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25466308%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

volume

477

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25466308%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

page(s)

144-154

1 reference

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Ruska H. Visualization of bacteriophage lysis in the hypermicroscope. Naturwissenschaften1940; 28:45-6.

24 February 2020

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Genomic diversity of Burkholderia pseudomallei clinical isolates: subtractive hybridization reveals a Burkholderia mallei-specific prophage in B. pseudomallei 1026b.

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Functional genomic analysis of two Staphylococcus aureus phages isolated from the dairy environment

7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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7 January 2021

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Analysis of the complete genome sequence of the lactococcal bacteriophage bIBB29

7 January 2021

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7 January 2021

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Genome sequence comparison and superinfection between two related Pseudomonas aeruginosa phages, D3112 and MP22.

7 January 2021

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Identification of host receptor and receptor-binding module of a newly sequenced T5-like phage EPS7.

7 January 2021

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Complete genome sequence of bacteriophage BC-611 specifically infecting Enterococcus faecalis strain NP-10011.

7 January 2021

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Isolation and characterization of a novel Staphylococcus aureus bacteriophage, phiMR25, and its therapeutic potential

7 January 2021

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A structured annotation frame for the transposable phages: a new proposed family "Saltoviridae" within the Caudovirales

7 January 2021

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Comparative analysis of the genomes of the temperate bacteriophages phi 11, phi 12 and phi 13 of Staphylococcus aureus 8325.

7 January 2021

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Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages

7 January 2021

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Characterization of wild lambdoid bacteriophages: detection of a wide distribution of phage immunity groups and identification of a nus-dependent, nonlambdoid phage group

7 January 2021

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wksl3, a New biocontrol agent for Salmonella enterica serovars enteritidis and typhimurium in foods: characterization, application, sequence analysis, and oral acute toxicity study

7 January 2021

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Genome sequence of the phage clP1, which infects the beer spoilage bacterium Pediococcus damnosus

7 January 2021

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Characterization of a T5-like coliphage, SPC35, and differential development of resistance to SPC35 in Salmonella enterica serovar typhimurium and Escherichia coli

7 January 2021

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7 January 2021

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Complete genome sequence of Salmonella bacteriophage SS3e

7 January 2021

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Complete Nucleotide Sequence and Molecular Characterization of Bacillus Phage TP21 and its Relatedness to Other Phages with the Same Name

7 January 2021

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Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3

7 January 2021

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7 January 2021

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Comparative genomic analysis of 18 Pseudomonas aeruginosa bacteriophages

7 January 2021

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7 January 2021

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Classification of Myoviridae bacteriophages using protein sequence similarity

7 January 2021

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Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools

7 January 2021

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Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches

7 January 2021

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Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPbeta

7 January 2021

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Comparison of genomes of three Xanthomonas oryzae bacteriophages

7 January 2021

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A novel lysozyme from Xanthomonas oryzae phage varphiXo411 active against Xanthomonas and Stenotrophomonas.

7 January 2021

1 reference

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Genomic characterization of the intron-containing T7-like phage phiL7 of Xanthomonas campestris

7 January 2021

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Complete genome sequence analysis of bacterial-flagellum-targeting bacteriophage chi.

7 January 2021

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Genomic analysis of bacteriophage ESP2949-1, which is virulent for Cronobacter sakazakii

7 January 2021

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Complete genome sequence of enterococcal bacteriophage SAP6.

7 January 2021

1 reference

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Genomic organization and molecular analysis of virulent bacteriophage 2972 infecting an exopolysaccharide-producing Streptococcus thermophilus strain

7 January 2021

1 reference

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Characterization and genome sequencing of a novel coliphage isolated from engineered Escherichia coli

7 January 2021

1 reference

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Reticulate representation of evolutionary and functional relationships between phage genomes

7 January 2021

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Isolation and characterization of an extremely long tail Thermus bacteriophage from Tengchong hot springs in China

7 January 2021

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Antimicrobial drug discovery through bacteriophage genomics.

7 January 2021

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Three Bacillus cereus bacteriophage endolysins are unrelated but reveal high homology to cell wall hydrolases from different bacilli

7 January 2021

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Genomic analysis of bacteriophage PhiJL001: insights into its interaction with a sponge-associated alpha-proteobacterium

7 January 2021

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Genomic characterization of six novel Bacillus pumilus bacteriophages

7 January 2021

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Sequence analysis of the Lactobacillus plantarum bacteriophage PhiJL-1.

7 January 2021

1 reference

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Isolation and characterization of a Lactobacillus plantarum bacteriophage, phiJL-1, from a cucumber fermentation

7 January 2021

1 reference

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7 January 2021

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Predominance of clones carrying Panton-Valentine leukocidin genes among methicillin-resistant Staphylococcus aureus strains isolated in Japanese hospitals from 1979 to 1985.

7 January 2021

1 reference

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Data mining pathogen genomes using GeneOrder and CoreGenes and CGUG: gene order, synteny and in silico proteomes

7 January 2021

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CGUG: in silico proteome and genome parsing tool for the determination of "core" and unique genes in the analysis of genomes up to ca. 1.9 Mb.

7 January 2021

1 reference

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Sequence and comparative genomic analysis of lactococcal bacteriophages jj50, 712 and P008: evolutionary insights into the 936 phage species.

7 January 2021

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Experimental protection of mice against lethal Staphylococcus aureus infection by novel bacteriophage phi MR11.

7 January 2021

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Genome organization and characterization of mycobacteriophage Bxb1

7 January 2021

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Genome comparison and proteomic characterization of Thermus thermophilus bacteriophages P23-45 and P74-26: siphoviruses with triplex-forming sequences and the longest known tails

7 January 2021

1 reference

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Genome sequence and gene expression of Bacillus anthracis bacteriophage Fah.

7 January 2021

1 reference

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Isolation and characterization of a bacteriophage F20 virulent to Enterobacter aerogenes

7 January 2021

1 reference

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Cohesive single-stranded ends of Streptomyces temperate bacteriophage R4

7 January 2021

1 reference

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Identification of the receptor-binding regions of pb5 proteins of bacteriophages T5 and BF23.

7 January 2021

1 reference

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Genomic characterization provides new insight into Salmonella phage diversity

7 January 2021

1 reference

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A genome-wide pairwise-identity-based proposal for the classification of viruses in the genus Mastrevirus (family Geminiviridae)

7 January 2021

1 reference

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Optimal alignments in linear space

7 January 2021

1 reference

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Phage conversion of Panton-Valentine leukocidin in Staphylococcus aureus: molecular analysis of a PVL-converting phage, phiSLT.

7 January 2021

1 reference

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Phage taxonomy: we agree to disagree

7 January 2021

1 reference

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Three-component-mediated serotype conversion in Pseudomonas aeruginosa by bacteriophage D3.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Genomic, proteomic and physiological characterization of a T5-like bacteriophage for control of Shiga toxin-producing Escherichia coli O157:H7.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Complete genome sequence of Escherichia coli O157:H7 lytic phage JL1.

7 January 2021

1 reference

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Complete genome sequence of Caulobacter crescentus bacteriophage φCbK.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Origins of highly mosaic mycobacteriophage genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Characterization and whole genome sequences of the Rhodococcus bacteriophages RGL3 and RER2.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Cluster K mycobacteriophages: insights into the evolutionary origins of mycobacteriophage TM4

7 January 2021

1 reference

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Cluster J mycobacteriophages: intron splicing in capsid and tail genes

7 January 2021

1 reference

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Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Evidence of host-virus co-evolution in tetranucleotide usage patterns of bacteriophages and eukaryotic viruses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

The dilemma of phage taxonomy illustrated by comparative genomics of Sfi21-like Siphoviridae in lactic acid bacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

FepA- and TonB-dependent bacteriophage H8: receptor binding and genomic sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

The genomes and comparative genomics of Lactobacillus delbrueckii phages

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

The genome and proteome of coliphage T1.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

The Phage Proteomic Tree: a genome-based taxonomy for phage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Evolution of Lactococcus lactis phages within a cheese factory.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Mycobacteriophages BPs, Angel and Halo: comparative genomics reveals a novel class of ultra-small mobile genetic elements

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Nucleotide sequence of bacteriophage lambda DNA.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Structure and function of phage p2 ORF34(p2), a new type of single-stranded DNA binding protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Sequence and organization of the lactococcal prolate-headed bIL67 phage genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Detailed genomic analysis of the Wbeta and gamma phages infecting Bacillus anthracis: implications for evolution of environmental fitness and antibiotic resistance

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Characterization of a novel temperate phage originating from a cereulide-producing Bacillus cereus strain

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

The complete genome sequence of the Streptomyces temperate phage straight phiC31: evolutionary relationships to other viruses

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Evolutionary relationships among actinophages and a putative adaptation for growth in Streptomyces spp

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Sequence analysis and characterization of phi O1205, a temperate bacteriophage infecting Streptococcus thermophilus CNRZ1205.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Divergence and mosaicism among virulent soil phages of the Burkholderia cepacia complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Complete genomic sequence of Salmonella enterica serovar Enteritidis phage SE2

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Complete genomic sequence of the lytic bacteriophage DT1 of Streptococcus thermophilus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Characterization of the Salmonella bacteriophage vB_SenS-Ent1.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Proteins responsible for lysogenic conversion caused by coliphages N15 and phi80 are highly homologous

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Complete sequence and evolutionary genomic analysis of the Pseudomonas aeruginosa transposable bacteriophage D3112.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

The genome of the novel phage Rtp, with a rosette-like tail tip, is homologous to the genome of phage T1

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Burkholderia thailandensis E125 harbors a temperate bacteriophage specific for Burkholderia mallei.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Phage conversion of exfoliative toxin A production in Staphylococcus aureus

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Comparative genomics and transduction potential of Enterococcus faecalis temperate bacteriophages

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Genome of Xanthomonas oryzae bacteriophage Xp10: an odd T-odd phage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

CoreGenes: a computational tool for identifying and cataloging "core" genes in a set of small genomes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Interaction between bacteriophage DMS3 and host CRISPR region inhibits group behaviors of Pseudomonas aeruginosa

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

Stalked bacteria: properties of deoxriybonucleic acid bacteriophage phiCbK.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

7 January 2021

Two groups of bacteriophages infecting Streptococcus thermophilus can be distinguished on the basis of mode of packaging and genetic determinants for major structural proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

7 January 2021

Comparative genomics of Streptococcus thermophilus phage species supports a modular evolution theory

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

7 January 2021

How Bacteriophage χ Attacks Motile Bacteria

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2014.10.016

7 January 2021