(Q42774137)

7 November 2017

Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories (English)

1 reference

7 November 2017

0 references

1 reference

Ann-Christine Syvänen

17

Ann-Christine Syvänen

0 references

Michael Sammeth

Michael Sammeth

4

0 references

Tuuli Lappalainen

Tuuli Lappalainen

Xavier Estivill i Pallejà

19

0 references

Xavier Estivill

16

0 references

Peter A.C. 't Hoen

1

Peter A C 't Hoen

1 reference

7 November 2017

2

Marc R Friedländer

1 reference

7 November 2017

7

Jeroen F J Laros

1 reference

7 November 2017

0 references

Roderic Guigó i Serra

15

Roderic Guigó

1 reference

7 November 2017

Jonas Almlöf

3

1 reference

7 November 2017

Irina Pulyakhina

5

1 reference

7 November 2017

Seyed Yahya Anvar

6

1 reference

7 November 2017

Henk P J Buermans

8

1 reference

7 November 2017

Olof Karlberg

9

1 reference

7 November 2017

Mathias Brännvall

10

1 reference

7 November 2017

GEUVADIS Consortium

11

1 reference

7 November 2017

Johan T den Dunnen

12

1 reference

7 November 2017

Gert-Jan B van Ommen

13

1 reference

7 November 2017

Ivo G Gut

14

1 reference

7 November 2017

Emmanouil T Dermitzakis

18

1 reference

7 November 2017

15 September 2013

1 reference

7 November 2017

1 reference

7 November 2017

31

1 reference

7 November 2017

1015-1022

1 reference

7 November 2017

11

1 reference

https://scigraph.springernature.com/pub.10.1038/nbt.2702

7 November 2017

0 references

cites work

Mapping and quantifying mammalian transcriptomes by RNA-Seq

1 reference

RNA sequencing: advances, challenges and opportunities

21 January 2018

1 reference

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

Stem cell transcriptome profiling via massive-scale mRNA sequencing

21 January 2018

1 reference

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

21 January 2018

1 reference

Relative power and sample size analysis on gene expression profiling data.

21 January 2018

1 reference

RNA-Seq vs dual- and single-channel microarray data: sensitivity analysis for differential expression and clustering

21 January 2018

1 reference

A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling

21 January 2018

1 reference

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

21 January 2018

1 reference

Comparison and calibration of transcriptome data from RNA-Seq and tiling arrays

21 January 2018

1 reference

Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum using RNA-Seq and microarrays

21 January 2018

1 reference

A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease

21 January 2018

1 reference

A comparison of RNA-Seq and high-density exon array for detecting differential gene expression between closely related species

21 January 2018

1 reference

Biases in Illumina transcriptome sequencing caused by random hexamer priming

21 January 2018

1 reference

Length bias correction for RNA-seq data in gene set analyses

21 January 2018

1 reference

Transcript length bias in RNA-seq data confounds systems biology

21 January 2018

1 reference

Improving RNA-Seq expression estimates by correcting for fragment bias

21 January 2018

1 reference

GC-content normalization for RNA-Seq data

21 January 2018

1 reference

Understanding mechanisms underlying human gene expression variation with RNA sequencing

21 January 2018

1 reference

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

21 January 2018

1 reference

Evaluation of DNA microarray results with quantitative gene expression platforms

21 January 2018

1 reference

The GEM mapper: fast, accurate and versatile alignment by filtration

21 January 2018

1 reference

SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells.

21 January 2018

1 reference

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

21 January 2018

1 reference

A Bayesian framework to account for complex non-genetic factors in gene expression levels greatly increases power in eQTL studies

21 January 2018

1 reference

Using probabilistic estimation of expression residuals (PEER) to obtain increased power and interpretability of gene expression analyses

21 January 2018

1 reference

Extent, causes, and consequences of small RNA expression variation in human adipose tissue

21 January 2018

1 reference

Summarizing and correcting the GC content bias in high-throughput sequencing

21 January 2018

1 reference

RSeQC: quality control of RNA-seq experiments

21 January 2018

1 reference

A tool for RNA sequencing sample identity check

21 January 2018

1 reference

MixupMapper: correcting sample mix-ups in genome-wide datasets increases power to detect small genetic effects.

21 January 2018

1 reference

Capturing heterogeneity in gene expression studies by surrogate variable analysis

21 January 2018

1 reference

Trans-eQTLs reveal that independent genetic variants associated with a complex phenotype converge on intermediate genes, with a major role for the HLA

21 January 2018

1 reference

Transcriptome genetics using second generation sequencing in a Caucasian population

21 January 2018

1 reference

Modelling and simulating generic RNA-Seq experiments with the flux simulator

21 January 2018

1 reference

Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

1 reference

The UCSC Table Browser data retrieval tool

21 January 2018

1 reference

Computational analysis of small RNA cloning data

21 January 2018

1 reference

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

21 January 2018

1 reference

Transcriptome and genome sequencing uncovers functional variation in humans

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24037425

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Performance comparison of one-color and two-color platforms within the MicroArray Quality Control (MAQC) project

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24037425

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NBT.2702

1 reference

7 November 2017

1 reference