(Q44145999)

English

Effect of mass spectrometric parameters on peptide and protein identification rates for shotgun proteomic experiments on an LTQ-orbitrap mass analyzer

scientific article published on 29 November 2011

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

Effect of mass spectrometric parameters on peptide and protein identification rates for shotgun proteomic experiments on an LTQ-orbitrap mass analyzer (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

Shotgun proteomics

1 reference

based on heuristic

inferred from title

2

object named as

Sonja Hess

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

author name string

Anastasia Kalli

1

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

publication date

29 November 2011

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

12

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

21-31

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

Performance evaluation of a hybrid linear ion trap/orbitrap mass spectrometer

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Interfacing the Orbitrap Mass Analyzer to an Electrospray Ion Source

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

The Orbitrap: a new mass spectrometer

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Electrostatic axially harmonic orbital trapping: a high-performance technique of mass analysis

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Performance of a linear ion trap-Orbitrap hybrid for peptide analysis

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Data-controlled automation of liquid chromatography/tandem mass spectrometry analysis of peptide mixtures

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Direct analysis of protein complexes using mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Direct analysis and identification of proteins in mixtures by LC/MS/MS and database searching at the low-femtomole level.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Interlaboratory study characterizing a yeast performance standard for benchmarking LC-MS platform performance.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Analysis of RP-HPLC loading conditions for maximizing peptide identifications in shotgun proteomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Systematical optimization of reverse-phase chromatography for shotgun proteomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Assessment of resolution parameters for CID-based shotgun proteomic experiments on the LTQ-Orbitrap mass spectrometer.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Comparison of different signal thresholds on data dependent sampling in Orbitrap and LTQ mass spectrometry for the identification of peptides and proteins in complex mixtures

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Effect of dynamic exclusion duration on spectral count based quantitative proteomics.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Factors that affect ion trap data-dependent MS/MS in proteomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Improving proteome coverage on a LTQ-Orbitrap using design of experiments

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Sample preparation and digestion for proteomic analyses using spin filters

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Universal sample preparation method for proteome analysis

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Comparison of Mascot and X!Tandem performance for low and high accuracy mass spectrometry and the development of an adjusted Mascot threshold

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Confident phosphorylation site localization using the Mascot Delta Score

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Genome-specific gas-phase fractionation strategy for improved shotgun proteomic profiling of proteotypic peptides.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Identification of 491 proteins in the tear fluid proteome reveals a large number of proteases and protease inhibitors

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Increasing proteome coverage with offline RP HPLC coupled to online RP nanoLC-MS.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

On the benefits of acquiring peptide fragment ions at high measured mass accuracy

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Optimization and use of peptide mass measurement accuracy in shotgun proteomics.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Precursor acquisition independent from ion count: how to dive deeper into the proteomics ocean.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Relationship between sample loading amount and peptide identification and its effects on quantitative proteomics.

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Shotgun proteomics implicates extracellular matrix proteins and protease systems in neuronal development induced by astrocyte cholinergic stimulation

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

The effects of mass accuracy, data acquisition speed, and search algorithm choice on peptide identification rates in phosphoproteomics

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

An integrated, directed mass spectrometric approach for in-depth characterization of complex peptide mixtures

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Global analysis of protein expression in yeast

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Ultra-High-Pressure RPLC Hyphenated to an LTQ-Orbitrap Velos Reveals a Linear Relation between Peak Capacity and Number of Identified Peptides

1 reference

https://api.crossref.org/works/10.1002%2FPMIC.201100464

21 January 2018

Identifiers

10.1002/PMIC.201100464

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 November 2017

ResearchGate publication ID

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