(Q44573284)

4 December 2017

Bioinformatic analysis of functional differences between the immunoproteasome and the constitutive proteasome (English)

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4 December 2017

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2

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4 December 2017

4

Paulien Hogeweg

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4 December 2017

Can Kesmir

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PubMed ID

12955356

4 December 2017

Rob J de Boer

series ordinal

3

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PubMed ID

12955356

4 December 2017

language of work or name

English

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publication date

30 August 2003

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4 December 2017

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4 December 2017

55

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4 December 2017

7

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4 December 2017

437-449

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https://scigraph.springernature.com/pub.10.1007/s00251-003-0585-6

4 December 2017

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cites work

Structural plasticity of the proteasome and its function in antigen processing.

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12 December 2020

Two new proteases in the MHC class I processing pathway

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12 December 2020

Abrogation of CTL Epitope Processing by Single Amino Acid Substitution Flanking the C-Terminal Proteasome Cleavage Site

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12 December 2020

Effects of major-histocompatibility-complex-encoded subunits on the peptidase and proteolytic activities of human 20S proteasomes. Cleavage of proteins and antigenic peptides

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12 December 2020

The function of the proteasome system in MHC class I antigen processing.

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12 December 2020

Altered properties of the branched chain amino acid-preferring activity contribute to increased cleavages after branched chain residues by the "immunoproteasome."

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12 December 2020

Cleavage motifs of the yeast 20S proteasome beta subunits deduced from digests of enolase 1.

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12 December 2020

Inhibition of ubiquitin/proteasome-dependent protein degradation by the Gly-Ala repeat domain of the Epstein-Barr virus nuclear antigen 1.

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12 December 2020

Different proteasome subtypes in a single tissue exhibit different enzymatic properties.

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12 December 2020

Incorporation of major histocompatibility complex--encoded subunits LMP2 and LMP7 changes the quality of the 20S proteasome polypeptide processing products independent of interferon-gamma

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12 December 2020

Bovine spleen multicatalytic proteinase complex (proteasome). Replacement of X, Y, and Z subunits by LMP7, LMP2, and MECL1 and changes in properties and specificity.

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12 December 2020

Expression of the proteasome activator PA28 rescues the presentation of a cytotoxic T lymphocyte epitope on melanoma cells.

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12 December 2020

The production of a new MAGE-3 peptide presented to cytolytic T lymphocytes by HLA-B40 requires the immunoproteasome

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12 December 2020

SYFPEITHI: database for MHC ligands and peptide motifs

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12 December 2020

IMGT/HLA Database--a sequence database for the human major histocompatibility complex

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12 December 2020

Discrete cleavage motifs of constitutive and immunoproteasomes revealed by quantitative analysis of cleavage products

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12 December 2020

Potential immunocompetence of proteolytic fragments produced by proteasomes before evolution of the vertebrate immune system

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12 December 2020

The role of the proteasome activator PA28 in MHC class I antigen processing

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12 December 2020

Clustering patterns of cytotoxic T-lymphocyte epitopes in human immunodeficiency virus type 1 (HIV-1) proteins reveal imprints of immune evasion on HIV-1 global variation

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12 December 2020

The sizes of peptides generated from protein by mammalian 26 and 20 S proteasomes. Implications for understanding the degradative mechanism and antigen presentation

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12 December 2020

Link between organ-specific antigen processing by 20S proteasomes and CD8(+) T cell-mediated autoimmunity

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12 December 2020

Differential processing of class-I-restricted epitopes by the standard proteasome and the immunoproteasome

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12 December 2020

MHC class I antigen processing of an adenovirus CTL epitope is linked to the levels of immunoproteasomes in infected cells

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12 December 2020

Positive darwinian selection observed at the variable-region genes of immunoglobulins

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12 December 2020

Interferon-gamma inducible exchanges of 20S proteasome active site subunits: why?

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12 December 2020

Differential influence on cytotoxic T lymphocyte epitope presentation by controlled expression of either proteasome immunosubunits or PA28

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12 December 2020

Genomic polymorphism, recombination, and linkage disequilibrium in human major histocompatibility complex-encoded antigen-processing genes

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12 December 2020

Allelic differences in the relationship between proteasome activity and MHC class I peptide loading.

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12 December 2020

A Single Residue Exchange Within a Viral CTL Epitope Alters Proteasome-Mediated Degradation Resulting in Lack of Antigen Presentation

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12 December 2020

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

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12 December 2020

Impaired immunoproteasome assembly and immune responses in PA28-/- mice.

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12 December 2020

Peptide antigen production by the proteasome: complexity provides efficiency

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12 December 2020

Kinetic evidences for facilitation of peptide channelling by the proteasome activator PA28.

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12 December 2020

The proteasome: paradigm of a self-compartmentalizing protease

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12 December 2020

Evolution of the proteasome components

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12 December 2020

Tissue distribution of constitutive proteasomes, immunoproteasomes, and PA28 in rats

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12 December 2020

Structure of 20S proteasome from yeast at 2.4 A resolution

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12 December 2020

Basic local alignment search tool

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12 December 2020

Association of immunoproteasomes with the endoplasmic reticulum

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12 December 2020

The catalytic sites of 20S proteasomes and their role in subunit maturation: a mutational and crystallographic study

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12 December 2020

The active sites of the eukaryotic 20 S proteasome and their involvement in subunit precursor processing

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12 December 2020

The MHC class I ligand-generating system: roles of immunoproteasomes and the interferon-gamma-inducible proteasome activator PA28.

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12 December 2020

Assessment of proteasomal cleavage probabilities from kinetic analysis of time-dependent product formation

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12 December 2020

Prediction of proteasome cleavage motifs by neural networks

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12 December 2020

Antigen processing by the proteasome

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12 December 2020

Processing of some antigens by the standard proteasome but not by the immunoproteasome results in poor presentation by dendritic cells

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12 December 2020

Evolution of proteasomal ATPases

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12 December 2020

Sequences that flank subdominant and cryptic epitopes influence the proteolytic generation of MHC class I-presented peptides

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12 December 2020

Sequence logos: a new way to display consensus sequences

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12 December 2020

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

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12 December 2020

Sequence signals for generation of antigenic peptides by the proteasome: implications for proteasomal cleavage mechanism

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12 December 2020

26S proteasomes and immunoproteasomes produce mainly N-extended versions of an antigenic peptide

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12 December 2020

Degradation of cell proteins and the generation of MHC class I-presented peptides

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12 December 2020

Mapping the active site of papain with the aid of peptide substrates and inhibitors

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12 December 2020

Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection

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12 December 2020

Cut and trim: generating MHC class I peptide ligands

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12 December 2020

Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection

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12 December 2020

Immunoproteasomes largely replace constitutive proteasomes during an antiviral and antibacterial immune response in the liver

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12 December 2020

Immunoproteasomes shape immunodominance hierarchies of antiviral CD8(+) T cells at the levels of T cell repertoire and presentation of viral antigens.

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12 December 2020

Efficient generation of a hepatitis B virus cytotoxic T lymphocyte epitope requires the structural features of immunoproteasomes

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12 December 2020

10.1007/S00251-003-0585-6

Identifiers

DOI

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4 December 2017

1 reference

PubMed ID

12955356