(Q46786621)

25 December 2017

title

lncRNA-MFDL: identification of human long non-coding RNAs by fusing multiple features and using deep learning (English)

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25 December 2017

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Xiao-Nan Fan

1

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25 December 2017

Shao-Wu Zhang

series ordinal

2

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25 December 2017

publication date

15 January 2015

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25 December 2017

published in

Molecular BioSystems

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25 December 2017

volume

11

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25 December 2017

issue

3

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25 December 2017

page(s)

892-897

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25 December 2017

describes a project that uses

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Finishing the euchromatic sequence of the human genome

1 reference

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ENCODE Project Writes Eulogy for Junk DNA

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Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments

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Long noncoding RNA, polycomb, and the ghosts haunting INK4b-ARF-INK4a expression

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A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA

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Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

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CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.

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Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis

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https://api.crossref.org/works/10.1039%2FC4MB00650J

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions

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CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Distinguishing protein-coding and noncoding genes in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Modular regulatory principles of large non-coding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Differentiating protein-coding and noncoding RNA: challenges and ambiguities

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic features

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1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

iSeeRNA: identification of long intergenic non-coding RNA transcripts from transcriptome sequencing data

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1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Computational identification of human long intergenic non-coding RNAs using a GA-SVM algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

A fast learning algorithm for deep belief nets

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https://api.crossref.org/works/10.1039%2FC4MB00650J

Representation learning: a review and new perspectives

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1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

GENCODE: the reference human genome annotation for The ENCODE Project

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Some remarks on protein attribute prediction and pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

MSLoc-DT: a new method for predicting the protein subcellular location of multispecies based on decision templates

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Vienna RNA secondary structure server

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

tRNA properties help shape codon pair preferences in open reading frames

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

MM-align: a quick algorithm for aligning multiple-chain protein complex structures using iterative dynamic programming

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Using the concept of Chou's pseudo amino acid composition to predict protein subcellular localization: an approach by incorporating evolutionary information and von Neumann entropies

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Using Chou's pseudo amino acid composition to predict protein quaternary structure: a sequence-segmented PseAAC approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Identification of protein-RNA interaction sites using the information of spatial adjacent residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

Genomics: The amazing complexity of the human transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC4MB00650J

21 January 2018

Identifiers

DOI

10.1039/C4MB00650J

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25 December 2017

PubMed ID

25588719

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25 December 2017