(Q47165136)

English

Using long-term experimental evolution to uncover the patterns and determinants of molecular evolution of an Escherichia coli natural isolate in the streptomycin-treated mouse gut.

scientific article published on 23 September 2016

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27661780%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Using long-term experimental evolution to uncover the patterns and determinants of molecular evolution of an Escherichia coli natural isolate in the streptomycin-treated mouse gut (English)

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27661780%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

experimental evolution

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based on heuristic

inferred from title

Escherichia coli

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based on heuristic

inferred from title

Mohamed Ghalayini

3

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23 March 2020

Olivier Tenaillon

9

object named as

Olivier Tenaillon

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23 March 2020

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Erick Denamur

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23 March 2020

author name string

Mathilde Lescat

1

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23 March 2020

Adrien Launay

2

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23 March 2020

Mélanie Magnan

4

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23 March 2020

Jérémy Glodt

5

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23 March 2020

Coralie Pintard

6

1 reference

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23 March 2020

Sara Dion

7

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23 March 2020

publication date

18 October 2016

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23 March 2020

Molecular Ecology

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23 March 2020

26

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23 March 2020

7

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23 March 2020

1802-1817

1 reference

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23 March 2020

Tempo and mode of genome evolution in a 50,000-generation experiment

1 reference

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1 reference

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Elucidating the molecular architecture of adaptation via evolve and resequence experiments

1 reference

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23 May 2018

Adaptation, Clonal Interference, and Frequency-Dependent Interactions in a Long-Term Evolution Experiment with Escherichia coli

1 reference

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The rule of declining adaptability in microbial evolution experiments.

1 reference

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Use of gnotobiotic mice to identify and characterize key microbes responsible for the development of the intestinal immune system

1 reference

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The conserved nhaAR operon is drastically divergent between B2 and non-B2 Escherichia coli and is involved in extra-intestinal virulence

1 reference

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Identification of mutations in laboratory-evolved microbes from next-generation sequencing data using breseq

1 reference

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23 May 2018

The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps

1 reference

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Fitness, stress resistance, and extraintestinal virulence in Escherichia coli.

1 reference

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23 May 2018

Nutritional basis for colonization resistance by human commensal Escherichia coli strains HS and Nissle 1917 against E. coli O157:H7 in the mouse intestine

1 reference

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23 May 2018

Genomics of adaptation during experimental evolution of the opportunistic pathogen Pseudomonas aeruginosa

1 reference

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23 May 2018

New insights into bacterial adaptation through in vivo and in silico experimental evolution

1 reference

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23 May 2018

The streptomycin-treated mouse intestine selects Escherichia coli envZ missense mutants that interact with dense and diverse intestinal microbiota

1 reference

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23 May 2018

Mutation Rate Inferred From Synonymous Substitutions in a Long-Term Evolution Experiment With Escherichia coli

1 reference

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23 May 2018

Evolutionary paths to antibiotic resistance under dynamically sustained drug selection

1 reference

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23 May 2018

Selection of resistant bacteria at very low antibiotic concentrations

1 reference

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23 May 2018

Enterotypes of the human gut microbiome

1 reference

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23 May 2018

RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media

1 reference

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Molecular and evolutionary bases of within-patient genotypic and phenotypic diversity in Escherichia coli extraintestinal infections

1 reference

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23 May 2018

Evidence that mutation is universally biased towards AT in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734618

23 May 2018

Pathogenicity-associated islands in extraintestinal pathogenic Escherichia coli are fitness elements involved in intestinal colonization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734618

23 May 2018

Adaptive evolution of Escherichia coli K-12 MG1655 during growth on a Nonnative carbon source, L-1,2-propanediol

1 reference

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Antibiotic resistance and its cost: is it possible to reverse resistance?

1 reference

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23 May 2018

The population genetics of commensal Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5734618

23 May 2018

Genome evolution and adaptation in a long-term experiment with Escherichia coli

1 reference

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23 May 2018

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

1 reference

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Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains

1 reference

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23 May 2018

Dissecting the genetic components of adaptation of Escherichia coli to the mouse gut.

1 reference

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Bacterial physiology, regulation and mutational adaptation in a chemostat environment

1 reference

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23 May 2018

Loss of a conserved 7-methylguanosine modification in 16S rRNA confers low-level streptomycin resistance in bacteria

1 reference

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How to become a uropathogen: comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains

1 reference

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A comprehensive library of fluorescent transcriptional reporters for Escherichia coli

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Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

1 reference

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The distribution and genetic structure of Escherichia coli in Australian vertebrates: host and geographic effects

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1 reference

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The link between phylogeny and virulence in Escherichia coli extraintestinal infection

1 reference

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The complete genome sequence of Escherichia coli K-12

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Physiological state of Escherichia coli BJ4 growing in the large intestines of streptomycin-treated mice

1 reference

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Cloning of the chromosomal determinants encoding hemolysin production and mannose-resistant hemagglutination in Escherichia coli

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1 reference

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1 reference

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1 reference

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based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/27661780

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1111/MEC.13851

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27661780%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27661780%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27661780%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

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