(Q47560330)

3 February 2018

title

Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner. (English)

1 reference

3 February 2018

0 references

0 references

14

1 reference

3 February 2018

Michael Poidinger

19

1 reference

3 February 2018

Sonia Garel

Sonia Garel

30

0 references

Pierre-Marie Lledo

21

Pierre-Marie Lledo

1 reference

3 February 2018

Melanie Greter

22

Melanie Greter

1 reference

3 February 2018

Amir Giladi

24

Ido Amit

1 reference

3 February 2018

Florent Ginhoux

29

Florent Ginhoux

1 reference

3 February 2018

Andreas Schlitzer

27

Andreas Schlitzer

1 reference

3 February 2018

Guillaume Hoeffel

10

Guillaume Hoeffel

1 reference

3 February 2018

Donovan Low

2

Donovan Low

1 reference

3 February 2018

Josephine Lum

16

Josephine Lum

1 reference

3 February 2018

Anis Larbi

18

Anis Larbi

1 reference

3 February 2018

Morgane Sonia Thion

1

Morgane Sonia Thion

1 reference

3 February 2018

Aymeric Silvin

3

Aymeric Silvin

1 reference

3 February 2018

author name string

Jinmiao Chen

4

1 reference

3 February 2018

Pauline Grisel

5

1 reference

3 February 2018

Jonas Schulte-Schrepping

6

1 reference

3 February 2018

Ronnie Blecher

7

1 reference

3 February 2018

Thomas Ulas

8

1 reference

3 February 2018

Paola Squarzoni

9

1 reference

3 February 2018

Fanny Coulpier

11

1 reference

3 February 2018

Eleni Siopi

12

1 reference

3 February 2018

Friederike Sophie David

13

1 reference

3 February 2018

Foo Shihui

15

1 reference

3 February 2018

Arlaine Anne Amoyo

17

1 reference

3 February 2018

Anne Buttgereit

20

1 reference

3 February 2018

Jerry Kok Yen Chan

23

1 reference

3 February 2018

Marc Beyer

25

1 reference

3 February 2018

Joachim Ludwig Schultze

26

1 reference

3 February 2018

Sven Pettersson

28

1 reference

3 February 2018

language of work or name

English

0 references

publication date

21 December 2017

1 reference

3 February 2018

published in

Cell

1 reference

3 February 2018

volume

172

1 reference

3 February 2018

page(s)

500-516.e16

1 reference

3 February 2018

issue

3

1 reference

3 February 2018

describes a project that uses

Cytoscape

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5786503/fullTextXML

inferred from PubMed Central ID database lookup

limma

Limma

2 references

22 June 2022

https://europepmc.org/article/PMC/5786503

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

WGCNA

R package WGCNA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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1 reference

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Ontogeny and homeostasis of CNS myeloid cells

22 May 2018

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Microglia Function in the Central Nervous System During Health and Neurodegeneration

22 May 2018

1 reference

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Role of microglia disturbances and immune-related marker abnormalities in cortical circuitry dysfunction in schizophrenia

22 May 2018

1 reference

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22 May 2018

1 reference

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Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease

22 May 2018

1 reference

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Impact of the gut microbiota on enhancer accessibility in gut intraepithelial lymphocytes

22 May 2018

1 reference

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The Indispensable Roles of Microglia and Astrocytes during Brain Development

22 May 2018

1 reference

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Convergence of Sex Differences and the Neuroimmune System in Autism Spectrum Disorder

22 May 2018

1 reference

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The immune system as a novel regulator of sex differences in brain and behavioral development.

22 May 2018

1 reference

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The Central Nervous System and the Gut Microbiome.

22 May 2018

1 reference

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Sex differences in immune responses

22 May 2018

1 reference

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The microbiota in adaptive immune homeostasis and disease

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Sex and Gender Differences in Central Nervous System-Related Disorders

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia across the lifespan: from origin to function in brain development, plasticity and cognition

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Visualizing Genomic Data Using Gviz and Bioconductor

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Sex differences in pain: a tale of two immune cells

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglial brain region-dependent diversity and selective regional sensitivities to aging.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

New insights on the role of microglia in synaptic pruning in health and disease

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Differential roles of resident microglia and infiltrating monocytes in murine CNS autoimmunity

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia Function in Central Nervous System Development and Plasticity

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Origin of microglia: current concepts and past controversies

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Sex and gender differences in autism spectrum disorder: summarizing evidence gaps and identifying emerging areas of priority

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Host microbiota constantly control maturation and function of microglia in the CNS.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Robust enumeration of cell subsets from tissue expression profiles

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia: multitasking specialists of the brain

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Environment drives selection and function of enhancers controlling tissue-specific macrophage identities

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Neural progenitor cells orchestrate microglia migration and positioning into the developing cortex

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

The gut microbiota influences blood-brain barrier permeability in mice

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Immunogenetics. Chromatin state dynamics during blood formation

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia as a critical player in both developmental and late-life CNS pathologies

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

A starring role for microglia in brain sex differences

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Gender differences in autoimmune disease

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Full-length RNA-seq from single cells using Smart-seq2.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Causal analysis approaches in Ingenuity Pathway Analysis

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

The microglial sensome revealed by direct RNA sequencing

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Gender bias in autoimmunity is influenced by microbiota.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Software for computing and annotating genomic ranges

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Cellular and molecular mechanisms controlling the migration of neocortical interneurons.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia emerge from erythromyeloid precursors via Pu.1- and Irf8-dependent pathways

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

STAR: ultrafast universal RNA-seq aligner

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Gender differences in schizophrenia and first-episode psychosis: a comprehensive literature review.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

IRF8 is a critical transcription factor for transforming microglia into a reactive phenotype

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

clusterProfiler: an R package for comparing biological themes among gene clusters.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Sex differences in microglial colonization of the developing rat brain

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Normal gut microbiota modulates brain development and behavior

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Fate mapping analysis reveals that adult microglia derive from primitive macrophages

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Network visualization and analysis of gene expression data using BioLayout Express(3D).

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

WGCNA: an R package for weighted correlation network analysis

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Model-based analysis of ChIP-Seq (MACS)

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Host inactivation of bacterial lipopolysaccharide prevents prolonged tolerance following gram-negative bacterial infection

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

lumi: a pipeline for processing Illumina microarray

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Visualizing spatiotemporal dynamics of multicellular cell-cycle progression

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Cytoscape: a software environment for integrated models of biomolecular interaction networks

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

On place and time: microglia in embryonic and perinatal brain development.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Wild Mouse Gut Microbiota Promotes Host Fitness and Improves Disease Resistance.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Generation of a microglial developmental index in mice and in humans reveals a sex difference in maturation and immune reactivity.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

An environment-dependent transcriptional network specifies human microglia identity

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

A new fate mapping system reveals context-dependent random or clonal expansion of microglia

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

P2Y12 receptor is expressed on human microglia under physiological conditions throughout development and is sensitive to neuroinflammatory diseases.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Sall1 is a transcriptional regulator defining microglia identity and function.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia development follows a stepwise program to regulate brain homeostasis.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia in Health and Disease.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Microglia modulate wiring of the embryonic forebrain.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Layer V cortical neurons require microglial support for survival during postnatal development.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Sex differences in the gut microbiome drive hormone-dependent regulation of autoimmunity.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Complex invasion pattern of the cerebral cortex bymicroglial cells during development of the mouse embryo.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

High density DNA methylation array with single CpG site resolution

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Orientation and expression of methicillin-resistant Staphylococcus aureus small RNAs by direct multiplexed measurements using the nCounter of NanoString technology

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Identification of kidney mesenchymal genes by a combination of microarray analysis and Sall1-GFP knockin mice.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5786503

Requirement for MD-1 in cell surface expression of RP105/CD180 and B-cell responsiveness to lipopolysaccharide

14 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29275859

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1016/J.CELL.2017.11.042

1 reference

3 February 2018

PMCID

5786503

1 reference

3 February 2018

PubMed ID

29275859

1 reference

3 February 2018