(Q52427399)

English

Large, Diverse Population Cohorts of hiPSCs and Derived Hepatocyte-like Cells Reveal Functional Genetic Variation at Blood Lipid-Associated Loci.

scientific article published in April 2017

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scholarly article

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Europe PubMed Central

PMC publication ID

1 May 2018

http://europepmc.org/abstract/PMC/5476422

Large, Diverse Population Cohorts of hiPSCs and Derived Hepatocyte-like Cells Reveal Functional Genetic Variation at Blood Lipid-Associated Loci. (English)

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Europe PubMed Central

PMC publication ID

1 May 2018

http://europepmc.org/abstract/PMC/5476422

genetic variation

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based on heuristic

inferred from title

Stephen A. Duncan

25

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1 May 2018

http://europepmc.org/abstract/PMC/5476422

Sekar Kathiresan

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Sekar Kathiresan

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1 May 2018

Tarjei S Mikkelsen

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Tarjei S Mikkelsen

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1 May 2018

http://europepmc.org/abstract/PMC/5476422

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Evanthia E Pashos

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1 May 2018

http://europepmc.org/abstract/PMC/5476422

YoSon Park

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http://europepmc.org/abstract/PMC/5476422

Xiao Wang

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Avanthi Raghavan

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Wenli Yang

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Deepti Abbey

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Derek T Peters

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Juan Arbelaez

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Mayda Hernandez

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Nicolas Kuperwasser

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Wenjun Li

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Zhaorui Lian

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Ying Liu

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http://europepmc.org/abstract/PMC/5476422

Wenjian Lv

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Stacey L Lytle-Gabbin

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Dawn H Marchadier

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Peter Rogov

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Jianting Shi

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Katherine J Slovik

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http://europepmc.org/abstract/PMC/5476422

Ioannis M Stylianou

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http://europepmc.org/abstract/PMC/5476422

Li Wang

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http://europepmc.org/abstract/PMC/5476422

Ruilan Yan

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http://europepmc.org/abstract/PMC/5476422

Xiaolan Zhang

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http://europepmc.org/abstract/PMC/5476422

Edward E Morrisey

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http://europepmc.org/abstract/PMC/5476422

Daniel J Rader

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http://europepmc.org/abstract/PMC/5476422

Christopher D Brown

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http://europepmc.org/abstract/PMC/5476422

Kiran Musunuru

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1 May 2018

http://europepmc.org/abstract/PMC/5476422

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publication date

1 April 2017

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1 May 2018

http://europepmc.org/abstract/PMC/5476422

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http://europepmc.org/abstract/PMC/5476422

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558-570.e10

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1 May 2018

http://europepmc.org/abstract/PMC/5476422

Analysis of Transcriptional Variability in a Large Human iPSC Library Reveals Genetic and Non-genetic Determinants of Heterogeneity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Direct Identification of Hundreds of Expression-Modulating Variants using a Multiplexed Reporter Assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Parkinson-associated risk variant in distal enhancer of α-synuclein modulates target gene expression

1 reference

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22 May 2018

A comparison of genetically matched cell lines reveals the equivalence of human iPSCs and ESCs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

WASP: allele-specific software for robust molecular quantitative trait locus discovery

1 reference

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22 May 2018

Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans

1 reference

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22 May 2018

Integrative analysis of 111 reference human epigenomes

1 reference

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22 May 2018

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

1 reference

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22 May 2018

QuASAR: quantitative allele-specific analysis of reads

1 reference

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22 May 2018

Bayesian test for colocalisation between pairs of genetic association studies using summary statistics

1 reference

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22 May 2018

Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system

1 reference

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22 May 2018

Discovery and refinement of loci associated with lipid levels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes

1 reference

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22 May 2018

Effectively identifying eQTLs from multiple tissues by combining mixed model and meta-analytic approaches

1 reference

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22 May 2018

Genome editing of human pluripotent stem cells to generate human cellular disease models

1 reference

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22 May 2018

Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

STAR: ultrafast universal RNA-seq aligner

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Bayesian refinement of association signals for 14 loci in 3 common diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Matrix eQTL: ultra fast eQTL analysis via large matrix operations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Interpreting meta-analyses of genome-wide association studies

1 reference

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22 May 2018

Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay

1 reference

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22 May 2018

Massively parallel functional dissection of mammalian enhancers in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

Identification, replication, and functional fine-mapping of expression quantitative trait loci in primary human liver tissue

1 reference

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22 May 2018

Investigating monogenic and complex diseases with pluripotent stem cells

1 reference

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22 May 2018

Trib1 is a lipid- and myocardial infarction-associated gene that regulates hepatic lipogenesis and VLDL production in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5476422

22 May 2018

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1 reference

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From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locus

1 reference

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Biological, clinical and population relevance of 95 loci for blood lipids

1 reference

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22 May 2018

Genomewide association studies and assessment of the risk of disease

1 reference

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A Bayesian framework to account for complex non-genetic factors in gene expression levels greatly increases power in eQTL studies

1 reference

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The Sequence Alignment/Map format and SAMtools

1 reference

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ToppGene Suite for gene list enrichment analysis and candidate gene prioritization

1 reference

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22 May 2018

pcaMethods--a bioconductor package providing PCA methods for incomplete data

1 reference

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1 reference

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1 reference

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13 August 2018

Identifiers

10.1016/J.STEM.2017.03.017

1 reference

Europe PubMed Central

PMC publication ID

1 May 2018

http://europepmc.org/abstract/PMC/5476422

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

1 May 2018

http://europepmc.org/abstract/PMC/5476422

1 reference

Europe PubMed Central

PMC publication ID

1 May 2018

http://europepmc.org/abstract/PMC/5476422

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