(Q60468470)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

title

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

single cell transcriptomics

24 March 2020

main subject

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

Zach M Collins

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

Sean G. Megason

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

Allon M Klein

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

James Alexander Briggs

4

object named as

James A Briggs

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

2

Caleb Weinreb

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

language of work or name

English

0 references

publication date

26 April 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

number of pages

7

1 reference

external data available at URL

inferred from page(s)

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE112294

1 reference

A curated database reveals trends in single-cell transcriptomics

https://www.nxn.se/single-cell-studies/data.tsv

7 February 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

volume

360

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

issue

6392

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

page(s)

981-987

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

24 March 2020

embryo

1 reference

A curated database reveals trends in single-cell transcriptomics

7 February 2021

https://www.nxn.se/single-cell-studies/data.tsv

cites work

Mesenchymal derivatives of the neural crest: analysis of chimaeric quail and chick embryos

1 reference

12 December 2020

Origin and organization of the zebrafish fate map

1 reference

12 December 2020

Regulation of neural induction by the Chd and Bmp-4 antagonistic patterning signals in Xenopus

1 reference

12 December 2020

Order and coherence in the fate map of the zebrafish nervous system

1 reference

12 December 2020

Xenopus chordin: a novel dorsalizing factor activated by organizer-specific homeobox genes

1 reference

12 December 2020

Stages of embryonic development of the zebrafish

1 reference

12 December 2020

Specification of cell fates at the dorsal margin of the zebrafish gastrula.

1 reference

12 December 2020

Dorsoventral patterning in Xenopus: inhibition of ventral signals by direct binding of chordin to BMP-4.

1 reference

12 December 2020

dino and mercedes, two genes regulating dorsal development in the zebrafish embryo.

1 reference

12 December 2020

The development of the posterior body in zebrafish.

1 reference

12 December 2020

The zebrafish organizer requires chordino

1 reference

12 December 2020

Differential regulation of chordin expression domains in mutant zebrafish

1 reference

12 December 2020

Origin and development of the zebrafish endoderm.

1 reference

12 December 2020

The fate of cells in the tailbud of Xenopus laevis

1 reference

12 December 2020

The olfactory placodes of the zebrafish form by convergence of cellular fields at the edge of the neural plate

1 reference

12 December 2020

Multipotentiality of the neural crest

1 reference

12 December 2020

Neural crest cell plasticity and its limits

1 reference

12 December 2020

Characterization of expanded intermediate cell mass in zebrafish chordin morphant embryos

1 reference

12 December 2020

Molecular genetics of axis formation in zebrafish

1 reference

12 December 2020

Tol2: a versatile gene transfer vector in vertebrates

1 reference

12 December 2020

Mechanisms of asymmetric cell division: flies and worms pave the way.

1 reference

12 December 2020

Bmp inhibition is necessary for post-gastrulation patterning and morphogenesis of the zebrafish tailbud

1 reference

12 December 2020

Enzymatic assembly of DNA molecules up to several hundred kilobases

1 reference

12 December 2020

Fate mapping embryonic blood in zebrafish: multi- and unipotential lineages are segregated at gastrulation

1 reference

12 December 2020

Redefining the progression of lineage segregations during mammalian embryogenesis by clonal analysis.

1 reference

12 December 2020

Fluorescence-activated cell sorting (FACS) of fluorescently tagged cells from zebrafish larvae for RNA isolation.

1 reference

12 December 2020

Single-cell analysis and sorting using droplet-based microfluidics

1 reference

12 December 2020

Efficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system

1 reference

12 December 2020

Quantitative single-cell RNA-seq with unique molecular identifiers

1 reference

12 December 2020

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

1 reference

12 December 2020

Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development

1 reference

12 December 2020

Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs

1 reference

12 December 2020

ForceAtlas2, a continuous graph layout algorithm for handy network visualization designed for the Gephi software.

1 reference

12 December 2020

Machine learning. Clustering by fast search and find of density peaks.

1 reference

12 December 2020

An ensemble-averaged, cell density-based digital model of zebrafish embryo development derived from light-sheet microscopy data with single-cell resolution.

1 reference

12 December 2020

Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.

1 reference

12 December 2020

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

1 reference

12 December 2020

Single-Cell RNA-Seq with Waterfall Reveals Molecular Cascades underlying Adult Neurogenesis

1 reference

12 December 2020

MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

1 reference

12 December 2020

The zebrafish tailbud contains two independent populations of midline progenitor cells that maintain long-term germ layer plasticity and differentiate in response to local signaling cues

1 reference

12 December 2020

CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq

1 reference

12 December 2020

Whole-organism lineage tracing by combinatorial and cumulative genome editing

1 reference

12 December 2020

Diffusion pseudotime robustly reconstructs lineage branching

1 reference

12 December 2020

Single-cell barcoding and sequencing using droplet microfluidics

1 reference

12 December 2020

A Gene Regulatory Network Balances Neural and Mesoderm Specification during Vertebrate Trunk Development

1 reference

12 December 2020

SPRING: a kinetic interface for visualizing high dimensional single-cell expression data

1 reference

12 December 2020

Identifiers

DOI

10.1126/SCIENCE.AAR4362

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29700229%20AND%20SRC:MED&resulttype=core&format=json

24 March 2020

PubMed publication ID

29700229

1 reference