(Q92065187)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

title

BioHackathon 2015: Semantics of data for life sciences and reproducible research (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

0 references

0 references

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Toshiaki Katayama

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Hiroyuki Mishima

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Shin Kawano

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Atsuko Yamaguchi

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Erick Antezana

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Jerven Bolleman

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Hidemasa U. Bono

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Atsushi Fukushima

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kouji Kozaki

39

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Thomas Lütteke

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Masaaki Kotera

43

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Attayeb S Mohsen

45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Núria Queralt Rosinach

60

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Shinya Suzuki

62

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kieron Taylor

65

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Mark D. Wilkinson

70

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Issaku Yamada

71

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

69

Chih-Hsuan Wei

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

75

Michel Dumontier

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

30

Tudor Groza

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kevin Bretonnel Cohen

22

Kevin B Cohen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

5

Shuichi Kawashima

0 references

Yuki Moriya

7

Yuki Moriya

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

10

Yasunori Yamamoto

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

14

Nobuyuki P Aoki

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

15

Kazuharu Arakawa

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

17

Evan Bolton

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

21

Hirokazu Chiba

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

23

Eric W Deutsch

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

Jesualdo Tomás Fernández-Breis

26 April 2020

24

Jesualdo T Fernández-Breis

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

29

Naohisa Goto

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

32

Robert Hoehndorf

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

34

Nick Juty

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

35

Takeshi Kawashima

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

41

Tatsuya Kushida

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

46

Hiroshi Mori

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

47

Yuki Naito

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

48

Takeru Nakazato

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

54

Tazro Ohta

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

55

Shujiro Okuda

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

56

Benedict Paten

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

59

Pjotr Prins

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

61

Daisuke Shinmachi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

66

Mark Thompson

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

67

Ikuo Uchiyama

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

77

Toshihisa Takagi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

author name string

Jin-Dong Kim

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Toshiaki Tokimatsu

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Hongyan Wu

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Peter Amstutz

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Raoul J P Bonnal

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kees Burger

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Gang Fu

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Takatomo Fujisawa

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Alexander García

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Colin Hercus

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kotone Itaya

33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Jee-Hyub Kim

36

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Akira R Kinjo

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Masaaki Kotera

38

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Sadahiro Kumagai

40

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Joe Miyamoto

44

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Jeremy Nguyen-Xuan

49

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kozo Nishida

50

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Naoki Nishida

51

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Hiroyo Nishide

52

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Soichi Ogishima

53

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Jean-Luc Perret

57

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Philip Prathipati

58

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Tsuyosi Tabata

63

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Terue Takatsuki

64

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Bruno Vieira

68

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Ryota Yamanaka

72

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kazutoshi Yoshitake

73

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Akiyasu C Yoshizawa

74

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

Kenjiro Kosaki

76

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

publication date

24 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

page(s)

136

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

26 April 2020

copyright license

start time

24 February 2020

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Toward a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of Taxa.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The health care and life sciences community profile for dataset descriptions

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Publishing FAIR Data: An Exemplar Methodology Utilizing PHI-Base

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Healthcare Hackathons Provide Educational and Innovation Opportunities: A Case Study and Best Practice Recommendations

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Orthology Ontology: development and applications

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Generation of open biomedical datasets through ontology-driven transformation and integration processes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

DisGeNET-RDF: harnessing the innovative power of the Semantic Web to explore the genetic basis of diseases

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Closing gaps between open software and public data in a hackathon setting: User-centered software prototyping

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Ontology for Biomedical Investigations

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PGP repository: a plant phenomics and genomics data publication infrastructure

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

An International Framework for Data Sharing: Moving Forward with the Global Alliance for Genomics and Health

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Using mobile sequencers in an academic classroom

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Brainhack: a collaborative workshop for the open neuroscience community

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Linking rare and common disease: mapping clinical disease-phenotypes to ontologies in therapeutic target validation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The FAIR Guiding Principles for scientific data management and stewardship

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Constructing a Computer-Aided Differential Diagnosis Engine from Open-Source APIs.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Hackathon as a way to raise awareness and foster innovation for stroke.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Data standards can boost metabolomics research, and if there is a will, there is a way

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Public Data Archiving in Ecology and Evolution: How Well Are We Doing?

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The NIH Big Data to Knowledge (BD2K) initiative

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Tools and data services registry: a community effort to document bioinformatics resources

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Perspective: Sustaining the big-data ecosystem

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Specifications of Standards in Systems and Synthetic Biology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

WikiPathways: capturing the full diversity of pathway knowledge

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

GlyTouCan 1.0--The international glycan structure repository

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KEGG as a reference resource for gene and protein annotation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The digital revolution in phenotyping

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PubChem Substance and Compound databases

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A systematic comparison of feature space effects on disease classifier performance for phenotype identification of five diseases

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Phenotype-driven strategies for exome prioritization of human Mendelian disease genes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

InChI, the IUPAC International Chemical Identifier

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The center for expanded data annotation and retrieval

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Using text mining techniques to extract phenotypic information from the PhenoCHF corpus

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Disease insights through cross-species phenotype comparisons

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Analysis of the human diseasome using phenotype similarity between common, genetic, and infectious diseases

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Automatically exposing OpenLifeData via SADI semantic Web Services

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Fossil Calibration Database-A New Resource for Divergence Dating

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MetaboAnalyst 3.0--making metabolomics more meaningful

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

An evidence-based approach to identify aging-related genes in Caenorhabditis elegans

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Construction of an ortholog database using the semantic web technology for integrative analysis of genomic data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MetaMapR: pathway independent metabolomic network analysis incorporating unknowns

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Handling and conversion of carbohydrate sequence formats and monosaccharide notation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Implementing the European Core Health Indicators (ECHI) in the Netherlands: an overview of data availability

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PathVisio 3: an extendable pathway analysis toolbox

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Orchestrating high-throughput genomic analysis with Bioconductor

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Aber-OWL: a framework for ontology-based data access in biology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Generation of silver standard concept annotations from biomedical texts with special relevance to phenotypes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Microtask crowdsourcing for disease mention annotation in PubMed abstracts

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Mass spectrometry-based plant metabolomics: Metabolite responses to abiotic stress.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Reproducibility in science: improving the standard for basic and preclinical research

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Integrated network analysis and effective tools in plant systems biology.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MBGD update 2015: microbial genome database for flexible ortholog analysis utilizing a diverse set of genomic data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

GlycoRDF: an ontology to standardize glycomics data in RDF

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PIERO ontology for analysis of biochemical transformations: effective implementation of reaction information in the IUBMB enzyme list

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

UniProt: a hub for protein information

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Modern plant metabolomics: advanced natural product gene discoveries, improved technologies, and future prospects

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Crowdsourcing knowledge discovery and innovations in medicine

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KEGGscape: a Cytoscape app for pathway data integration

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A network perspective on nitrogen metabolism from model to crop plants using integrated 'omics' approaches.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Less noise, more hacking: how to deploy principles from MIT's hacking medicine to accelerate health care.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Big data and other challenges in the quest for orthologs

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Enriched biodiversity data as a resource and service

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Toward personalizing treatment for depression: predicting diagnosis and severity

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Complex epilepsy phenotype extraction from narrative clinical discharge summaries.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Human symptoms-disease network

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

WURCS: the Web3 unique representation of carbohydrate structures.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KEGGViewer, a BioJS component to visualize KEGG Pathways.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Mass spectrometry in plant metabolomics strategies: from analytical platforms to data acquisition and processing

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Toolboxes for a standardised and systematic study of glycans

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Mining the ultimate phenome repository

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KNApSAcK Metabolite Activity Database for retrieving the relationships between metabolites and biological activities.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Introducing glycomics data into the Semantic Web.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

UniCarbKB: building a knowledge platform for glycoproteomics

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A review of approaches to identifying patient phenotype cohorts using electronic health records.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

TreeFam v9: a new website, more species and orthology-on-the-fly

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Experimental design-based functional mining and characterization of high-throughput sequencing data in the sequence read archive

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Mouse model phenotypes provide information about human drug targets

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Cancer Genome Atlas Pan-Cancer analysis project

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Proposed minimum reporting standards for chemical analysis

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Pathview: an R/Bioconductor package for pathway-based data integration and visualization

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Ontology-Based Querying with Bio2RDF's Linked Open Data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A task-based approach for Gene Ontology evaluation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Epilepsy and seizure ontology: towards an epilepsy informatics infrastructure for clinical research and patient care.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The MetaboLights repository: curation challenges in metabolomics

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Mining FDA drug labels for medical conditions

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Recent progress in the development of metabolome databases for plant systems biology.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Comprehensive classification and perspective for modelling photorespiratory metabolism.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A global approach to analysis and interpretation of metabolic data for plant natural product discovery.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Open PHACTS: semantic interoperability for drug discovery

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Deep phenotyping for precision medicine

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MouseFinder: Candidate disease genes from mouse phenotype data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PASSEL: the PeptideAtlas SRMexperiment library

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MIPHENO: data normalization for high throughput metabolite analysis

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Reconstruction of Arabidopsis metabolic network models accounting for subcellular compartmentalization and tissue-specificity

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Disease Ontology: a backbone for disease semantic integration

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KEGG for integration and interpretation of large-scale molecular data sets

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Protein Data Bank Japan (PDBj): maintaining a structural data archive and resource description framework format

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Formulating a researchable question: A critical step for facilitating good clinical research

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Recommendations for reporting metabolite data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PhenomeNET: a whole-phenome approach to disease gene discovery

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

BioAssay Ontology (BAO): a semantic description of bioassays and high-throughput screening results

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Letter to the editor: SeqXML and OrthoXML: standards for sequence and orthology information

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Mass spectrometry strategies in metabolomics

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

On the formalization and reuse of scientific research

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

BIO::Phylo-phyloinformatic analysis using perl

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Big data, but are we ready?

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Chloroplast 2010: a database for large-scale phenotypic screening of Arabidopsis mutants.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Pathway Commons, a web resource for biological pathway data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The MetabolomeExpress Project: enabling web-based processing, analysis and transparent dissemination of GC/MS metabolomics datasets

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MassBank: a public repository for sharing mass spectral data for life sciences

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Modeling sample variables with an Experimental Factor Ontology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Computer science. Accessible reproducible research

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A side effect resource to capture phenotypic effects of drugs

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Linking human diseases to animal models using ontology-based phenotype annotation

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Initial implementation of a comparative data analysis ontology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

OGO: an ontological approach for integrating knowledge about orthology.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

BioGateway: a semantic systems biology tool for the life sciences

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

A genome-scale metabolic model of Arabidopsis and some of its properties

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Co-expression tools for plant biology: opportunities for hypothesis generation and caveats

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Biological knowledge management: the emerging role of the Semantic Web technologies

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Estimating the relative order of speciation or coalescence events on a given phylogeny

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

DECIPHER: Database of Chromosomal Imbalance and Phenotype in Humans Using Ensembl Resources

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Metabolomics for functional genomics, systems biology, and biotechnology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Drug target identification using side-effect similarity

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

ProteoWizard: open source software for rapid proteomics tools development

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The EXACT description of biomedical protocols

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

GlycoCT-a unifying sequence format for carbohydrates

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

ChEBI: a database and ontology for chemical entities of biological interest

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

LC-MS/MS assay for protein amino acids and metabolically related compounds for large-scale screening of metabolic phenotypes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

An ontology of scientific experiments

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

GLYDE-an expressive XML standard for the representation of glycan structure.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

PRIDE: the proteomics identifications database

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Relations in biomedical ontologies

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

KCaM (KEGG Carbohydrate Matcher): a software tool for analyzing the structures of carbohydrate sugar chains

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

TANDEM: matching proteins with tandem mass spectra

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The Unified Medical Language System (UMLS): integrating biomedical terminology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Text generation in clinical medicine--a review

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The PDB format, mmCIF, and other data formats

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

LINUCS: linear notation for unique description of carbohydrate sequences

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

The evolutionary fate and consequences of duplicate genes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Gene ontology: tool for the unification of biology

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

Probability-based protein identification by searching sequence databases using mass spectrometry data

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7141167

SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules

23 February 2021

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1021/CI00057A005

Querying neXtProt nanopublications and their value for insights on sequence variants and tissue expression

11 September 2021

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Publishing DisGeNET as nanopublications

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

The PDB Format, mmCIF Formats, and Other Data Formats

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Interoperability and FAIRness through a novel combination of Web technologies

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

SADI Semantic Web Services - ‚cause you can't always GET what you want!

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

FORCE11: Building the Future for Research Communications and e-Scholarship

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

FOAF: Connecting People on the Semantic Web

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Ontology Metadata Vocabulary and Applications

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Building Global Infrastructure for Data Sharing and Exchange Through the Research Data Alliance

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Description of several chemical structure file formats used by computer programs developed at Molecular Design Limited

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Bio2RDF Release 2: Improved Coverage, Interoperability and Provenance of Life Science Linked Data

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

Building Natural Language Generation Systems

1 reference

COCI

https://opencitations.net/index/coci/api/v1/references/10.12688/F1000RESEARCH.18236.1

10.12688/F1000RESEARCH.18236.1

28 October 2023

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32308977%20AND%20SRC:MED&resulttype=core&format=json

26 April 2020

PubMed publication ID

32308977

1 reference