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Cross-Species Insights Into Genomic Adaptations to Hypoxia
scientific article published on 22 July 2020
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7387696
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29 August 2020
title
Cross-Species Insights Into Genomic Adaptations to Hypoxia
(English)
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Europe PubMed Central
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7387696
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29 August 2020
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Matthew E Pamenter
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1
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Europe PubMed Central
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7387696
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29 August 2020
James E Hall
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7387696
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29 August 2020
Yuuka Tanabe
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29 August 2020
Tatum S Simonson
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4
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29 August 2020
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22 July 2020
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29 August 2020
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Frontiers in Genetics
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7387696
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29 August 2020
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11
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29 August 2020
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29 August 2020
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22 July 2020
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10 February 2021
Naked mole rats exhibit metabolic but not ventilatory plasticity following chronic sustained hypoxia.
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10 February 2021
Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus).
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10 February 2021
HMOX2 Functions as a Modifier Gene for High-Altitude Adaptation in Tibetans.
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10 February 2021
Yak whole-genome resequencing reveals domestication signatures and prehistoric population expansions
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10 February 2021
Endothelin regulates intermittent hypoxia-induced lipolytic remodelling of adipose tissue and phosphorylation of hormone-sensitive lipase
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10 February 2021
Genetic adaptations of the plateau zokor in high-elevation burrows
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10 February 2021
ROCK2 and MYLK variants under hypobaric hypoxic environment of high altitude associate with high altitude pulmonary edema and adaptation
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10 February 2021
Shared Genetic Signals of Hypoxia Adaptation in Drosophila and in High-Altitude Human Populations
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10 February 2021
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10 February 2021
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10 February 2021
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10 February 2021
Thioredoxin Reductase 2 (Txnrd2) Regulates Mitochondrial Integrity in the Progression of Age-Related Heart Failure
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10 February 2021
Arginase inhibition protects against hypoxia‑induced pulmonary arterial hypertension.
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10 February 2021
Altitude Adaptation: A Glimpse Through Various Lenses
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10 February 2021
Comparative transcriptomic analysis revealed adaptation mechanism of Phrynocephalus erythrurus, the highest altitude Lizard living in the Qinghai-Tibet Plateau
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10 February 2021
Endothelin receptors and their antagonists
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10 February 2021
A novel candidate region for genetic adaptation to high altitude in Andean populations
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10 February 2021
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10 February 2021
RE1-Silencing Transcription Factor (Rest) is a Novel Regulator of Osteoblast Differentiation
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10 February 2021
The physiological effects of hypobaric hypoxia versus normobaric hypoxia: a systematic review of crossover trials
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10 February 2021
Oxygen in demand: How oxygen has shaped vertebrate physiology
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10 February 2021
ADAMTS proteases in vascular biology
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10 February 2021
The roller coaster flight strategy of bar-headed geese conserves energy during Himalayan migrations
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10 February 2021
Adenosine receptors mediate the hypoxic ventilatory response but not the hypoxic metabolic response in the naked mole rat during acute hypoxia.
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10 February 2021
Exploring the genetic basis of adaptation to high elevations in reptiles: a comparative transcriptome analysis of two toad-headed agamas (genus Phrynocephalus)
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10 February 2021
King of the mountains: Tibetan and Sherpa physiological adaptations for life at high altitude
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10 February 2021
Paleoindian settlement of the high-altitude Peruvian Andes
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10 February 2021
Human high-altitude adaptation: forward genetics meets the HIF pathway.
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10 February 2021
Population history and genomic signatures for high-altitude adaptation in Tibetan pigs
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10 February 2021
Widespread signals of convergent adaptation to high altitude in Asia and america
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10 February 2021
Maternal PRKAA1 and EDNRA genotypes are associated with birth weight, and PRKAA1 with uterine artery diameter and metabolic homeostasis at high altitude
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10 February 2021
GPR126 protein regulates developmental and pathological angiogenesis through modulation of VEGFR2 receptor signaling
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10 February 2021
A genetic mechanism for Tibetan high-altitude adaptation
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10 February 2021
Genetic convergence in the adaptation of dogs and humans to the high-altitude environment of the tibetan plateau
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10 February 2021
Hypoxia adaptations in the grey wolf (Canis lupus chanco) from Qinghai-Tibet Plateau
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10 February 2021
Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA
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10 February 2021
Whole-genome sequencing of six dog breeds from continuous altitudes reveals adaptation to high-altitude hypoxia
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10 February 2021
Defective Tibetan PHD2 binding to p23 links high altitude adaption to altered oxygen sensing
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10 February 2021
The Andean adaptive toolkit to counteract high altitude maladaptation: genome-wide and phenotypic analysis of the Collas
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10 February 2021
Shared and unique signals of high-altitude adaptation in geographically distinct Tibetan populations
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10 February 2021
Hypoxia-inducible factor 3 is an oxygen-dependent transcription activator and regulates a distinct transcriptional response to hypoxia
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10 February 2021
Whole genome sequencing of Ethiopian highlanders reveals conserved hypoxia tolerance genes
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10 February 2021
Loss of PINK1 attenuates HIF-1α induction by preventing 4E-BP1-dependent switch in protein translation under hypoxia
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10 February 2021
Population variation revealed high-altitude adaptation of Tibetan mastiffs
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10 February 2021
Admixture facilitates genetic adaptations to high altitude in Tibet
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10 February 2021
A genome wide study of genetic adaptation to high altitude in feral Andean Horses of the páramo
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10 February 2021
Human adaptation to the hypoxia of high altitude: the Tibetan paradigm from the pregenomic to the postgenomic era.
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10 February 2021
Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars
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10 February 2021
Recent human adaptation: genomic approaches, interpretation and insights
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10 February 2021
Whole-genome sequencing uncovers the genetic basis of chronic mountain sickness in Andean highlanders
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10 February 2021
Ground tit genome reveals avian adaptation to living at high altitudes in the Tibetan plateau.
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10 February 2021
Sirtuin-7 inhibits the activity of hypoxia-inducible factors
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10 February 2021
Genetic evidence of paleolithic colonization and neolithic expansion of modern humans on the tibetan plateau
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10 February 2021
Draft genome sequence of the Tibetan antelope
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10 February 2021
Genetic signatures reveal high-altitude adaptation in a set of ethiopian populations
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10 February 2021
Genetic diversity, linkage disequilibrium and selection signatures in chinese and Western pigs revealed by genome-wide SNP markers
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10 February 2021
The different mechanisms of hypoxic acclimatization and adaptation in Lizard Phrynocephalus vlangalii living on Qinghai-Tibet Plateau
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10 February 2021
Regulation of erythropoiesis by hypoxia-inducible factors
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10 February 2021
The genetic architecture of adaptations to high altitude in Ethiopia
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10 February 2021
Intermittent hypoxia-activated cyclooxygenase pathway: role in atherosclerosis.
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10 February 2021
Lipid phosphate phosphatase (LPP3) and vascular development
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10 February 2021
HIF-1 expression is associated with CCL2 chemokine expression in airway inflammatory cells: implications in allergic airway inflammation.
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10 February 2021
Adaptive and maladaptive cardiorespiratory responses to continuous and intermittent hypoxia mediated by hypoxia-inducible factors 1 and 2.
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10 February 2021
The yak genome and adaptation to life at high altitude
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10 February 2021
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10 February 2021
Matriptase-2 (TMPRSS6) is directly up-regulated by hypoxia inducible factor-1: identification of a hypoxia-responsive element in the TMPRSS6 promoter region
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10 February 2021
Metabolic insight into mechanisms of high-altitude adaptation in Tibetans
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10 February 2021
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10 February 2021
Genetic adaptation to high altitude in the Ethiopian highlands
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10 February 2021
Genome sequencing reveals insights into physiology and longevity of the naked mole rat
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10 February 2021
TGFBR3, a potential negative regulator of TGF-β signaling, protects cardiac fibroblasts from hypoxia-induced apoptosis
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10 February 2021
Hypoxia: adapting to high altitude by mutating EPAS-1, the gene encoding HIF-2α.
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10 February 2021
A HIF-1 target, ATIA, protects cells from apoptosis by modulating the mitochondrial thioredoxin, TRX2
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10 February 2021
Roles of the human hypoxia-inducible factor (HIF)-3α variants in the hypoxia response
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10 February 2021
PRCP: a key to blood vessel homeostasis
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10 February 2021
Hypoxia-inducible factor regulates expression of surfactant protein in alveolar type II cells in vitro
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10 February 2021
Hypoxia increases sirtuin 1 expression in a hypoxia-inducible factor-dependent manner
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10 February 2021
The hypoxia-inducible transcription factor pathway regulates oxygen sensing in the simplest animal, Trichoplax adhaerens
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10 February 2021
Genetic variations in Tibetan populations and high-altitude adaptation at the Himalayas
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10 February 2021
A genome-wide search for signals of high-altitude adaptation in Tibetans
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10 February 2021
EGLN1 involvement in high-altitude adaptation revealed through genetic analysis of extreme constitution types defined in Ayurveda
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10 February 2021
Identifying signatures of natural selection in Tibetan and Andean populations using dense genome scan data
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10 February 2021
Hypoxia inducible factor 1alpha gene (HIF-1alpha) splice variants: potential prognostic biomarkers in breast cancer.
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10 February 2021
Sequencing of 50 human exomes reveals adaptation to high altitude
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10 February 2021
Natural selection on EPAS1 (HIF2alpha) associated with low hemoglobin concentration in Tibetan highlanders
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PubMed Central
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10 February 2021
Hypoxia induces intracellular Ca2+ release by causing reactive oxygen species-mediated dissociation of FK506-binding protein 12.6 from ryanodine receptor 2 in pulmonary artery myocytes
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PubMed Central
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10 February 2021
Genetic evidence for high-altitude adaptation in Tibet
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10 February 2021
Hypoxia-inducible factor (HIF)-3alpha is subject to extensive alternative splicing in human tissues and cancer cells and is regulated by HIF-1 but not HIF-2.
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PubMed Central
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10 February 2021
Linking actin dynamics and gene transcription to drive cellular motile functions
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PubMed Central
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10 February 2021
Hypoxia-inducible factor-1-dependent mechanisms of vascularization and vascular remodelling
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10 February 2021
Genetic analysis of 17 Y-chromosomal STRs haplotypes of Chinese Tibetan ethnic minority group.
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10 February 2021
The E2 ubiquitin-conjugating enzymes direct polyubiquitination to preferred lysines
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PubMed Central
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10 February 2021
Endothelial cells are activated during hypoxia via endoglin/ALK-1/SMAD1/5 signaling in vivo and in vitro
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PubMed Central
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10 February 2021
Identifying positive selection candidate loci for high-altitude adaptation in Andean populations.
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10 February 2021
A genome-wide association analysis of serum iron concentrations
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PubMed Central
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10 February 2021
Genome-wide association study identifies variants in TMPRSS6 associated with hemoglobin levels
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Identification, analysis, and prediction of protein ubiquitination sites
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PubMed Central
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10 February 2021
Evolutionary and functional insights into the mechanism underlying high-altitude adaptation of deer mouse hemoglobin
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10 February 2021
Erythrocytosis-associated HIF-2alpha mutations demonstrate a critical role for residues C-terminal to the hydroxylacceptor proline
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Essential role of developmentally activated hypoxia-inducible factor 1alpha for cardiac morphogenesis and function.
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PubMed Central
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10 February 2021
Role of the phosphatidylinositol-3-kinase and extracellular regulated kinase pathways in the induction of hypoxia-inducible factor (HIF)-1 activity and the HIF-1 target vascular endothelial growth factor in ovarian granulosa cells in response to fol
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10 February 2021
Angiopoietin-1 protects mesenchymal stem cells against serum deprivation and hypoxia-induced apoptosis through the PI3K/Akt pathway
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PubMed Central
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10 February 2021
Thyroid hormone induces hypoxia-inducible factor 1alpha gene expression through thyroid hormone receptor beta/retinoid x receptor alpha-dependent activation of hepatic leukemia factor
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
SUMO-specific protease 1 is essential for stabilization of HIF1alpha during hypoxia
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PubMed Central
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10 February 2021
Blood characteristics for high altitude adaptation in Tibetan chickens.
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10 February 2021
Power of genome-wide association studies in the presence of interacting loci
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10 February 2021
Two routes to functional adaptation: Tibetan and Andean high-altitude natives
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
The molecular basis of high-altitude adaptation in deer mice
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10 February 2021
Acute postnatal ablation of Hif-2alpha results in anemia
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PubMed Central
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10 February 2021
Hypoxia tolerance in mammals and birds: from the wilderness to the clinic
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10 February 2021
Hypoxia tolerance in reptiles, amphibians, and fishes: life with variable oxygen availability
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Blood-gas properties of plateau zokor (Myospalax baileyi).
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10 February 2021
Flight performance and competitive displacement of hummingbirds across elevational gradients
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PubMed Central
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10 February 2021
Possible roles of the hereditary hemochromatosis protein, HFE, in regulating cellular iron homeostasis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
MHC class II proteins and disease: a structural perspective
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10 February 2021
Role of the progressive ankylosis gene in cartilage mineralization
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10 February 2021
HIF-1-dependent repression of equilibrative nucleoside transporter (ENT) in hypoxia
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Consensus statement on chronic and subacute high altitude diseases
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10 February 2021
Hypoxia-dependent activation of HIF into a transcriptional regulator
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Nitric oxide inhibitor altitude-dependently elevates pulmonary arterial pressure in high-altitude adapted yaks.
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10 February 2021
Resolution of a paradox: hummingbird flight at high elevation does not come without a cost
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10 February 2021
Differential function of the prolyl hydroxylases PHD1, PHD2, and PHD3 in the regulation of hypoxia-inducible factor
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
HIF hydroxylation and cellular oxygen sensing
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10 February 2021
Oxygen sensing by HIF hydroxylases
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
mSharp-1/DEC2, a basic helix-loop-helix protein functions as a transcriptional repressor of E box activity and Stra13 expression
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Multiple splice variants of the human HIF-3 alpha locus are targets of the von Hippel-Lindau E3 ubiquitin ligase complex
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Attenuation of HIF-1 DNA-binding activity limits hypoxia-inducible endothelin-1 expression
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10 February 2021
The crystal structure of bar-headed goose hemoglobin in deoxy form: the allosteric mechanism of a hemoglobin species with high oxygen affinity
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Novel VEGF family members: VEGF-B, VEGF-C and VEGF-D.
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10 February 2021
HIFalpha targeted for VHL-mediated destruction by proline hydroxylation: implications for O2 sensing
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10 February 2021
Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Platelet-activating factor acetylhydrolases in health and disease
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
ETL, a novel seven-transmembrane receptor that is developmentally regulated in the heart. ETL is a member of the secretin family and belongs to the epidermal growth factor-seven-transmembrane subfamily
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10 February 2021
Two splice variants of the hypoxia-inducible factor HIF-1alpha as potential dimerization partners of ARNT2 in neurons
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Identification of alternative spliced variants of human hypoxia-inducible factor-1alpha
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
The tumour suppressor protein VHL targets hypoxia-inducible factors for oxygen-dependent proteolysis
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Growth factors acting via endothelial cell-specific receptor tyrosine kinases: VEGFs, angiopoietins, and ephrins in vascular development
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Ventilation and hypoxic ventilatory response of Tibetan and Aymara high altitude natives.
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10 February 2021
Hypoxia Response Elements in the Aldolase A, Enolase 1, and Lactate Dehydrogenase A Gene Promoters Contain Essential Binding Sites for Hypoxia-inducible Factor 1
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
An essential role for p300/CBP in the cellular response to hypoxia
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10 February 2021
Expression of melanoma cell adhesion molecule in intermediate trophoblast.
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10 February 2021
Unifying theory of hypoxia tolerance: molecular/metabolic defense and rescue mechanisms for surviving oxygen lack.
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10 February 2021
In vivo expression of mRNAs encoding hypoxia-inducible factor 1
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10 February 2021
Dimerization, DNA binding, and transactivation properties of hypoxia-inducible factor 1
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10 February 2021
The crystal structure of a high oxygen affinity species of haemoglobin (bar-headed goose haemoglobin in the oxy form)
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Complete primary structure of the human alpha 3(IV) collagen chain. Coexpression of the alpha 3(IV) and alpha 4(IV) collagen chains in human tissues.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Hypoxia-inducible factor 1 is a basic-helix-loop-helix-PAS heterodimer regulated by cellular O2 tension
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10 February 2021
Hemoglobin
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10 February 2021
Functional characterization of fetal and adult yak hemoglobins: an oxygen binding cascade and its molecular basis
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10 February 2021
Increasing prevalence of excessive erythrocytosis with age among healthy high-altitude miners
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10 February 2021
Defense strategies against hypoxia and hypothermia
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10 February 2021
Characterization of two types of fetal hemoglobin: alpha 2G gamma 2 and alpha 2A gamma 2
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=7387696
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10 February 2021
Primary structure and oxygen-binding properties of the hemoglobin from guanaco (Lama guanacoë, Tylopoda)
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10 February 2021
Adaptation of bird hemoglobins to high altitudes: demonstration of molecular mechanism by protein engineering
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10 February 2021
Blood respiratory properties in the naked mole rat Heterocephalus glaber, a mammal of low body temperature
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10 February 2021
Identifiers
DOI
10.3389/FGENE.2020.00743
1 reference
stated in
Europe PubMed Central
PMCID
7387696
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32849780%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 August 2020
PMCID
7387696
1 reference
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Europe PubMed Central
PMCID
7387696
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32849780%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 August 2020
PubMed ID
32849780
1 reference
stated in
Europe PubMed Central
PMCID
7387696
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32849780%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 August 2020
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