Wikidata:Property proposal/hPSCreg cell line ID
hPSCreg cell line ID edit
Originally proposed at Wikidata:Property proposal/Natural science
| Description | identifier for a cell line in the Human Pluripotent Stem Cell Registry (hPSCreg) |
|---|---|
| Represents | Human Pluripotent Stem Cell Registry (Q106457711) |
| Data type | External identifier |
| Domain | cell line (Q21014462) |
| Allowed values | ^[A-Z]+(?:[A-Za-z0-9-_]{0,30}) |
| Example 1 | 201B7 (Q27554318) → KUIFMSi004-C |
| Example 2 | ZZUi005-A (Q53996684) → ZZUi005-A |
| Example 3 | 18b (Q54582501) → HVRDi006-A |
| Example 4 | HPSI1116i-wakr_3 (Q54891700) → WTSIi659-A |
| Planned use | add identifier to existing items about cell lines |
| Number of IDs in source | currently about 3000 fully registered cell lines, plus about 2000 other entries |
| Expected completeness | always incomplete (Q21873886) |
| Formatter URL | https://hpscreg.eu/cell-line/$1 |
| Robot and gadget jobs | The existing workflow for managing Cellosaurus ID (P3289) could be adapted to include coverage of this new hPSCreg property. |
| See also | Cell Line Ontology ID (P2158), Cellosaurus ID (P3289), parent cell line (P3432), autologous cell line (P3578), established from medical condition (P5166), has marker (P8872), derived from organism type (P9072) |
| Applicable "stated in"-value | Human Pluripotent Stem Cell Registry (Q106457711) |
| Distinct-values constraint | yes |
Motivation edit
This cell line database maps to several databases that already have Wikidata properties, especially Cellosaurus ID (P3289) and Cell Line Ontology ID (P2158), through which most of the cell lines indexed in hPSCreg already have Wikidata items. Note that hPSCreg entries are based on names for cell lines, not identifiers. As the names change, the location of the information in hPSCreg is updated, with the original name redirecting to the current one (example: ISMMSe002-B now redirects to WAe001-A-2). In Wikidata, this could be reflected by tagging the ISMMSe002-B statement as deprecated and the WAe001-A-2 one as preferred. conflict of interest (Q211067): I recently joined the team at Fraunhofer Institute for Biomedical Engineering (Q1167435) which runs Human Pluripotent Stem Cell Registry (Q106457711). Daniel Mietchen (talk) 00:34, 11 April 2021 (UTC)
Discussion edit
Notified participants of WikiProject Medicine. --Daniel Mietchen (talk) 00:37, 11 April 2021 (UTC)
Support Nice database, valuable connection for Wikidata. TiagoLubiana (talk) 23:30, 11 April 2021 (UTC)
- Support Very useful. --Amb sib (talk) 15:57, 12 April 2021 (UTC)
@Daniel Mietchen, TiagoLubiana, Amb sib: 
Done Now hPSCreg cell line ID (P9554). --Lymantria (talk) 05:55, 12 May 2021 (UTC)