(Q104470312)

19

object named as

Melanie Ott

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author name string

Ruofan Wang

1

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Camille R Simoneau

2

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Jessie Kulsuptrakul

3

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Mehdi Bouhaddou

4

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Katherine A Travisano

5

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Jennifer M Hayashi

6

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Jared Carlson-Stevermer

7

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James R Zengel

8

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Christopher M Richards

9

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Parinaz Fozouni

10

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Jennifer Oki

11

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Lauren Rodriguez

12

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Bastian Joehnk

13

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Keith Walcott

14

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Kevin Holden

15

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Anita Sil

16

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Jan E Carette

17

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Andreas S Puschnik

describes a project that uses

20

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language of work or name

English

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publication date

9 December 2020

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published in

Cell

0 references

Cytoscape

1 reference

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Identification of the neuroblastoma-amplified gene product as a component of the syntaxin 18 complex implicated in Golgi-to-endoplasmic reticulum retrograde transport

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

CORVET and HOPS tethering complexes - coordinators of endosome and lysosome fusion

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Anterograde or retrograde transsynaptic labeling of CNS neurons with vesicular stomatitis virus vectors

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Infectious disease. Combating emerging viral threats

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

TMPRSS2 activates the human coronavirus 229E for cathepsin-independent host cell entry and is expressed in viral target cells in the respiratory epithelium

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

PI3K isoforms in cell signalling and vesicle trafficking

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Retrospective on Cholesterol Homeostasis: The Central Role of Scap

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A versatile viral system for expression and depletion of proteins in mammalian cells

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Ebola virus entry requires the cholesterol transporter Niemann-Pick C1

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Pathway Commons, a web resource for biological pathway data

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Cellular cholesterol abundance regulates potassium accumulation within endosomes and is an important determinant in bunyavirus entry

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

SARS-CoV-2 Infection Depends on Cellular Heparan Sulfate and ACE2

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Network propagation: a universal amplifier of genetic associations

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Therapeutic targeting of the NRF2 and KEAP1 partnership in chronic diseases

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Can Activation of NRF2 Be a Strategy against COVID-19?

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Relation of Statin Use Prior to Admission to Severity and Recovery Among COVID-19 Inpatients

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Identification of Required Host Factors for SARS-CoV-2 Infection in Human Cells

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A Replication-Competent Vesicular Stomatitis Virus for Studies of SARS-CoV-2 Spike-Mediated Cell Entry and Its Inhibition

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

An interactive web-based dashboard to track COVID-19 in real time

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Identification of a novel coronavirus in patients with severe acute respiratory syndrome

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Survey of Human Chromosome 21 Gene Expression Effects on Early Development in Danio rerio.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Ambra1 regulates autophagy and development of the nervous system

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A genome-wide CRISPR screen identifies N-acetylglucosamine-1-phosphate transferase as a potential antiviral target for Ebola virus

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Human Coronavirus: Host-Pathogen Interaction

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Pharmacologic inhibition of site 1 protease activity inhibits sterol regulatory element-binding protein processing and reduces lipogenic enzyme gene expression and lipid synthesis in cultured cells and experimental animals

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

The Ccz1-Mon1-Rab7 module and Rab5 control distinct steps of autophagy.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A Multibasic Cleavage Site in the Spike Protein of SARS-CoV-2 Is Essential for Infection of Human Lung Cells

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Human coronavirus NL63 employs the severe acute respiratory syndrome coronavirus receptor for cellular entry

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

NPC1 regulates ER contacts with endocytic organelles to mediate cholesterol egress

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Human coronaviruses OC43 and HKU1 bind to 9--acetylated sialic acids via a conserved receptor-binding site in spike protein domain A

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A selective PIKfyve inhibitor blocks PtdIns(3,5)P(2) production and disrupts endomembrane transport and retroviral budding

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

The HOPS complex mediates autophagosome-lysosome fusion through interaction with syntaxin 17

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

COT drives resistance to RAF inhibition through MAP kinase pathway reactivation

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A small molecule that blocks fat synthesis by inhibiting the activation of SREBP.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Inhibition of PIKfyve kinase prevents infection by Zaire ebolavirus and SARS-CoV-2

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Tollip and Tom1 form a complex and recruit ubiquitin-conjugated proteins onto early endosomes

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Loss of TMEM106B Ameliorates Lysosomal and Frontotemporal Dementia-Related Phenotypes in Progranulin-Deficient Mice.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Haploid Genetic Screen Reveals a Profound and Direct Dependence on Cholesterol for Hantavirus Membrane Fusion

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Binding of Vac14 to neuronal nitric oxide synthase: Characterisation of a new internal PDZ-recognition motif

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Functional assessment of cell entry and receptor usage for SARS-CoV-2 and other lineage B betacoronaviruses

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Angiotensin-converting enzyme 2 is a functional receptor for the SARS coronavirus

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Synthetic oleanane triterpenoids: multifunctional drugs with a broad range of applications for prevention and treatment of chronic disease.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

The FTLD Risk Factor TMEM106B Regulates the Transport of Lysosomes at the Axon Initial Segment of Motoneurons

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

GPHR is a novel anion channel critical for acidification and functions of the Golgi apparatus

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Electroporation and RNA interference in the rodent retina in vivo and in vitro

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Enhanced isolation of SARS-CoV-2 by TMPRSS2-expressing cells

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

The cytoplasmic tail of the severe acute respiratory syndrome coronavirus spike protein contains a novel endoplasmic reticulum retrieval signal that binds COPI and promotes interaction with membrane protein

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

TMEM41B is a novel regulator of autophagy and lipid mobilization

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

SARS-CoV2-mediated suppression of NRF2-signaling reveals potent antiviral and anti-inflammatory activity of 4-octyl-itaconate and dimethyl fumarate

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Characterization of spike glycoprotein of SARS-CoV-2 on virus entry and its immune cross-reactivity with SARS-CoV

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

The major cellular sterol regulatory pathway is required for Andes virus infection

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Comparing SARS-CoV-2 with SARS-CoV and influenza pandemics

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A CRISPR toolbox to study virus-host interactions

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Genome engineering using the CRISPR-Cas9 system

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A Genetic Screen Identifies a Critical Role for the WDR81-WDR91 Complex in the Trafficking and Degradation of Tetherin.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A highly potent and selective Vps34 inhibitor alters vesicle trafficking and autophagy

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Spinster is required for autophagic lysosome reformation and mTOR reactivation following starvation

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

TRIM28 regulates the nuclear accumulation and toxicity of both alpha-synuclein and tau.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Lysosome biogenesis and lysosomal membrane proteins: trafficking meets function

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Improved vectors and genome-wide libraries for CRISPR screening

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Middle East respiratory syndrome coronavirus infection mediated by the transmembrane serine protease TMPRSS2.

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

PIKfyve and its Lipid products in health and in sickness

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Inhibitors of cathepsin L prevent severe acute respiratory syndrome coronavirus entry

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Lentivirus-delivered stable gene silencing by RNAi in primary cells

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Glycan Engagement by Viruses: Receptor Switches and Specificity

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

GLay: community structure analysis of biological networks

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Human coronaviruses: what do they cause?

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Genome-wide CRISPR Screens Reveal Host Factors Critical for SARS-CoV-2 Infection

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

A new coronavirus associated with human respiratory disease in China

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Human aminopeptidase N is a receptor for human coronavirus 229E

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

In-Hospital Use of Statins Is Associated with a Reduced Risk of Mortality among Individuals with COVID-19

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770

Robust hepatitis C virus infection in vitro

25 December 2020

1 reference

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7723770