(Q30405350)

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A computational-experimental approach identifies mutations that enhance surface expression of an oseltamivir-resistant influenza neuraminidase

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scholarly article

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Europe PubMed Central

PMC publication ID

14 October 2017

A computational-experimental approach identifies mutations that enhance surface expression of an oseltamivir-resistant influenza neuraminidase (English)

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Europe PubMed Central

PMC publication ID

14 October 2017

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1

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Europe PubMed Central

PMC publication ID

14 October 2017

David Baltimore

3

object named as

David Baltimore

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Europe PubMed Central

PMC publication ID

14 October 2017

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Jagannath S Nayak

2

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Europe PubMed Central

PMC publication ID

14 October 2017

language of work or name

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publication date

20 July 2011

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Europe PubMed Central

PMC publication ID

14 October 2017

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Europe PubMed Central

PMC publication ID

14 October 2017

6

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Europe PubMed Central

PMC publication ID

14 October 2017

7

1 reference

Europe PubMed Central

PMC publication ID

14 October 2017

e22201

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Europe PubMed Central

PMC publication ID

14 October 2017

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Creative Commons Attribution 4.0 International

20 July 2011

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April 2022 Public Data File from Crossref

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describes a project that uses

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Europe PubMed Central

18 June 2022

https://europepmc.org/article/PMC/3140507

based on heuristic

inferred from PubMed Central ID database lookup

Influenza A virus hemagglutinin antibody escape promotes neuraminidase antigenic variation and drug resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Multidrug-resistant 2009 pandemic influenza A(H1N1) viruses maintain fitness and transmissibility in ferrets

1 reference

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20 June 2018

Pandemic H1N1 2009 influenza virus with the H275Y oseltamivir resistance neuraminidase mutation shows a small compromise in enzyme activity and viral fitness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Generation and characterization of recombinant pandemic influenza A(H1N1) viruses resistant to neuraminidase inhibitors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Early findings of oseltamivir-resistant pandemic (H1N1) 2009 influenza A viruses in Taiwan

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Characterization of oseltamivir-resistant 2009 H1N1 pandemic influenza A viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Oseltamivir-resistant variants of the 2009 pandemic H1N1 influenza A virus are not attenuated in the guinea pig and ferret transmission models.

1 reference

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20 June 2018

Oseltamivir-resistant pandemic H1N1/2009 influenza virus possesses lower transmissibility and fitness in ferrets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Oseltamivir-resistant influenza A(H1N1) viruses in south of France, 2007/2009.

1 reference

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20 June 2018

Oseltamivir-resistant pandemic A/H1N1 virus is as virulent as its wild-type counterpart in mice and ferrets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Permissive secondary mutations enable the evolution of influenza oseltamivir resistance

1 reference

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20 June 2018

A two-year survey of the oseltamivir-resistant influenza A(H1N1) virus in Yamagata, Japan and the clinical effectiveness of oseltamivir and zanamivir

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Protein kinetic stability.

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20 June 2018

Fitness epistasis and constraints on adaptation in a human immunodeficiency virus type 1 protein region

1 reference

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Generation of live attenuated novel influenza virus A/California/7/09 (H1N1) vaccines with high yield in embryonated chicken eggs

1 reference

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20 June 2018

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

1 reference

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20 June 2018

Inferring stabilizing mutations from protein phylogenies: application to influenza hemagglutinin

1 reference

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20 June 2018

Global transmission of oseltamivir-resistant influenza

1 reference

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20 June 2018

Use of oseltamivir in 12 European countries between 2002 and 2007--lack of association with the appearance of oseltamivir-resistant influenza A(H1N1) viruses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Rational stabilization of enzymes by computational redesign of surface charge-charge interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Structural Characterization of the 1918 Influenza Virus H1N1 Neuraminidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Enzymatic properties of the neuraminidase of seasonal H1N1 influenza viruses provide insights for the emergence of natural resistance to oseltamivir

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Evolutionary history of a specialized p450 propane monooxygenase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

The influenza virus resource at the National Center for Biotechnology Information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Protein stability imposes limits on organism complexity and speed of molecular evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Crystal structure of an ancient protein: evolution by conformational epistasis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Thermodynamics of neutral protein evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Relative tolerance of mesostable and thermostable protein homologs to extensive mutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design.

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Compensatory substitutions restore normal core assembly in simian immunodeficiency virus isolates with Gag epitope cytotoxic T-lymphocyte escape mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

CUPSAT: prediction of protein stability upon point mutations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Darwinian evolution can follow only very few mutational paths to fitter proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Protein stability promotes evolvability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Thermodynamic prediction of protein neutrality

1 reference

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20 June 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

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Overexpression of the alpha-2,6-sialyltransferase in MDCK cells increases influenza virus sensitivity to neuraminidase inhibitors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

On different facets of regularization theory.

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Potential applications and pitfalls of Bayesian inference of phylogeny

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20 June 2018

The H274Y mutation in the influenza A/H1N1 neuraminidase active site following oseltamivir phosphate treatment leave virus severely compromised both in vitro and in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

20 June 2018

Evolution of an antibiotic resistance enzyme constrained by stability and activity trade-offs

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140507

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Bayesian inference of phylogeny and its impact on evolutionary biology

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A novel influenza A virus mitochondrial protein that induces cell death.

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20 June 2018

Selection of influenza virus mutants in experimentally infected volunteers treated with oseltamivir

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A DNA transfection system for generation of influenza A virus from eight plasmids

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Mutational analysis of the propensity for amyloid formation by a globular protein

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Transition-state structure as a unifying basis in protein-folding mechanisms: contact order, chain topology, stability, and the extended nucleus mechanism

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Alteration of T4 lysozyme structure by second-site reversion of deleterious mutations

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20 June 2018

Enhancement of protein stability by the combination of point mutations in T4 lysozyme is additive

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20 June 2018

Engineering multiple properties of a protein by combinatorial mutagenesis

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20 June 2018

Evolutionary trees from DNA sequences: A maximum likelihood approach

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20 June 2018

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20 June 2018

Genetic analysis of protein stability and function

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20 June 2018

Large increases in general stability for subtilisin BPN' through incremental changes in the free energy of unfolding

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20 June 2018

Additivity of mutational effects in proteins

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20 June 2018

Influenza viruses resistant to the antiviral drug oseltamivir: transmission studies in ferrets

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21 January 2018

Effect of the neuraminidase mutation H274Y conferring resistance to oseltamivir on the replicative capacity and virulence of old and recent human influenza A(H1N1) viruses

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21 January 2018

Infections with oseltamivir-resistant influenza A(H1N1) virus in the United States

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21 January 2018

Emergence of H274Y oseltamivir-resistant A(H1N1) influenza viruses in Japan during the 2008-2009 season

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0022201

21 January 2018

Structural basis for oseltamivir resistance of influenza viruses

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0022201

21 January 2018

Relation between protein stability, evolution and structure, as probed by carboxylic acid mutations.

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21 January 2018

Natural selection for kinetic stability is a likely origin of correlations between mutational effects on protein energetics and frequencies of amino acid occurrences in sequence alignments.

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21 January 2018

On the relationship between protein stability and folding kinetics: a comparative study of the N-terminal domains of RNase HI, E. coli and Bacillus stearothermophilus L9.

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21 January 2018

Investigating the effects of mutations on protein aggregation in the cell.

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21 January 2018

Maximum Likelihood and Minimum-Steps Methods for Estimating Evolutionary Trees from Data on Discrete Characters

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21 January 2018

A global initiative on sharing avian flu data

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21 January 2018

Sequence statistics reliably predict stabilizing mutations in a protein domain

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21 January 2018

Update on oseltamivir-resistant pandemic A (H1N1) 2009 influenza virus: January 2010

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26 November 2018

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26 November 2018

Systematic variation of amino acid substitutions for stringent assessment of pairwise covariation

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26 November 2018

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26 November 2018

Linear correlation between thermal stability and folding kinetics of lysozyme

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12 December 2020

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Global suppression of protein folding defects and inclusion body formation

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The consensus concept for thermostability engineering of proteins: further proof of concept

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Why are proteins marginally stable?

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based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0022201

1 reference

Europe PubMed Central

PMC publication ID

14 October 2017

2011PLoSO...622201B

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 October 2017

ResearchGate publication ID

0 references

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