(Q30945047)

27 June 2017

title

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies (English)

1 reference

27 June 2017

7

Hélène Bergès

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Patricia Faivre-Rampant

35

Patricia Faivre-Rampant

0 references

Jérôme Salse

37

Jérôme Salse

0 references

Christophe Plomion

1

Christophe Plomion

0 references

Céline Lalanne

23

Céline Lalanne

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Grégoire Le Provost

26

Grégoire Le Provost

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Jean-Charles Leplé

25

Jean-Charles Leplé

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Hadi Quesneville

38

Hadi Quesneville

0 references

Catherine Bodénès

8

Catherine Bodénès

0 references

Valérie Barbe

5

Valérie Barbe

0 references

Caroline Belser

Caroline Belser

6

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Jean-Marc Aury

Jean-Marc Aury

2

0 references

Arnaud Couloux

Arnaud Couloux

12

0 references

Sébastien Duplessis

Sébastien Duplessis

14

0 references

Corinne Da Silva

Corinne Da Silva

13

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Antoine Kremer

Antoine Kremer

39

0 references

Francis Martin

29

Francis Martin

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27 June 2017

36

Patrick Wincker

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27 June 2017

21

Christophe Klopp

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27 June 2017

Florent Murat

32

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ORCID Public Data File 2021

Nicolas Francillonne

18

Nicolas Francillonne

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27 June 2017

27

Thibault Leroy

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27 June 2017

31

Célia Michotey

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27 June 2017

4

Tina Alaeitabar

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27 June 2017

22

Karine Labadie

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27 June 2017

15

François Ehrenmann

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27 June 2017

Joëlle Amselem

3

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27 June 2017

Nathalie Boudet

9

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27 June 2017

Christophe Boury

10

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27 June 2017

Aurélie Canaguier

11

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27 June 2017

Barbara Estrada-Mairey

16

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27 June 2017

Stéphanie Fouteau

17

1 reference

27 June 2017

Christine Gaspin

19

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27 June 2017

Cécile Guichard

20

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27 June 2017

Isabelle Le Clainche

24

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27 June 2017

Isabelle Lesur

28

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27 June 2017

Jonathan Mercier

30

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27 June 2017

Franck Salin

33

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27 June 2017

Delphine Steinbach

34

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27 June 2017

publication date

6 May 2015

1 reference

Molecular Ecology Resources

27 June 2017

published in

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27 June 2017

volume

16

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27 June 2017

issue

1

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27 June 2017

page(s)

254-265

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Potential for evolutionary responses to climate change - evidence from tree populations

27 June 2017

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Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data

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To what extent is altitudinal variation of functional traits driven by genetic adaptation in European oak and beech?

21 January 2018

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Comparison of quantitative trait loci for adaptive traits between oak and chestnut based on an expressed sequence tag consensus map.

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Transcriptome analysis of bud burst in sessile oak (Quercus petraea).

21 January 2018

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21 January 2018

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Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

21 January 2018

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Crop genome sequencing: lessons and rationales

21 January 2018

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Considering transposable element diversification in de novo annotation approaches

21 January 2018

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VISTA: computational tools for comparative genomics

21 January 2018

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Transcriptional changes in two types of pre-mycorrhizal roots and in ectomycorrhizas of oak microcuttings inoculated with Piloderma croceum.

21 January 2018

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21 January 2018

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21 January 2018

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Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags

21 January 2018

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The genome of the cucumber, Cucumis sativus L

21 January 2018

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HaploMerger: reconstructing allelic relationships for polymorphic diploid genome assemblies

21 January 2018

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Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

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Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads.

21 January 2018

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Integrated transcriptomics and metabolomics decipher differences in the resistance of pedunculate oak to the herbivore Tortrix viridana L.

21 January 2018

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Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor

21 January 2018

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Role of waterlogging-responsive genes in shaping interspecific differentiation between two sympatric oak species

21 January 2018

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Species relative abundance and direction of introgression in oaks.

21 January 2018

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Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks

21 January 2018

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The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

21 January 2018

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The sequence and de novo assembly of the giant panda genome

21 January 2018

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SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

21 January 2018

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The First 50 Plant Genomes

21 January 2018

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Unpublished genomic data-how to share?

21 January 2018

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Infernal 1.1: 100-fold faster RNA homology searches

21 January 2018

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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

21 January 2018

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YASS: enhancing the sensitivity of DNA similarity search

21 January 2018

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The Norway spruce genome sequence and conifer genome evolution

21 January 2018

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Fagaceae trees as models to integrate ecology, evolution and genomics.

21 January 2018

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21 January 2018

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Identification of adaptation-specific differences in mRNA expression of sessile and pedunculate oak based on osmotic-stress-induced genes

21 January 2018

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Combined evidence annotation of transposable elements in genome sequences

21 January 2018

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InterProScan: protein domains identifier

21 January 2018

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In silico archeogenomics unveils modern plant genome organisation, regulation and evolution

21 January 2018

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21 January 2018

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Detection of quantitative trait loci controlling bud burst and height growth in Quercus robur L.

21 January 2018

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21 January 2018

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21 January 2018

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21 January 2018

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The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

21 January 2018

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Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12425

Comparison of next generation sequencing technologies for transcriptome characterization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F1755-0998.12425

The genome of Eucalyptus grandis

21 January 2018

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1038/NATURE13308

15 July 2023

Identifiers

DOI

10.1111/1755-0998.12425

1 reference

27 June 2017

1 reference