(Q33406244)

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Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair.

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20 January 2020

Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair (English)

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20 January 2020

Hélène Gaillard

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20 January 2020

Cristina González-Aguilera

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20 January 2020

María L García-Rubio

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20 January 2020

Alfonso Rodríguez-Gil

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20 January 2020

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20 January 2020

José L. Revuelta

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20 January 2020

Sebastián Chávez

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20 January 2020

Andrés Aguilera

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20 January 2020

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Cristina Tous

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20 January 2020

Javier Botet

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20 January 2020

Maria José Quintero

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20 January 2020

Laia Viladevall

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20 January 2020

Antonio Marín

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20 January 2020

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6 February 2009

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20 January 2020

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20 January 2020

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20 January 2020

e1000364

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20 January 2020

2

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20 January 2020

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Creative Commons Attribution 4.0 International

6 February 2009

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0 references

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1 reference

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Diverse roles for histone H2A modifications in DNA damage response pathways in yeast

1 reference

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Breaking barriers to transcription elongation

1 reference

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1 reference

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1 reference

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Roles for Gcn5p and Ada2p in transcription and nucleotide excision repair at the Saccharomyces cerevisiae MET16 gene

1 reference

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Initiation of DNA repair mediated by a stalled RNA polymerase IIO.

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1 reference

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DNA damage and replication stress induced transcription of RNR genes is dependent on the Ccr4-Not complex.

1 reference

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A Requirement for the Saccharomyces cerevisiae Paf1 complex in snoRNA 3' end formation

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Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome

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1 reference

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Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae

1 reference

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1 reference

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1 reference

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The Paf1 complex physically and functionally associates with transcription elongation factors in vivo

1 reference

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1 reference

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1 reference

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Mechanisms of transcription-coupled DNA repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Requirement for yeast RAD26, a homolog of the human CSB gene, in elongation by RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

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Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Genetic evidence supports a role for the yeast CCR4-NOT complex in transcriptional elongation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

The Saccharomyces cerevisiae RAD9 cell cycle checkpoint gene is required for optimal repair of UV-induced pyrimidine dimers in both G(1) and G(2)/M phases of the cell cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Spt4 modulates Rad26 requirement in transcription-coupled nucleotide excision repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Transcription-coupled DNA repair in yeast transcription factor IIE (TFIIE) mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

A complex containing RNA polymerase II, Paf1p, Cdc73p, Hpr1p, and Ccr4p plays a role in protein kinase C signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Defective Kin28, a subunit of yeast TFIIH, impairs transcription-coupled but not global genome nucleotide excision repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

The Saccharomyces cerevisiae RAD9, RAD17, RAD24 and MEC3 genes are required for tolerating irreparable, ultraviolet-induced DNA damage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Ultraviolet radiation-induced ubiquitination and proteasomal degradation of the large subunit of RNA polymerase II. Implications for transcription-coupled DNA repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

Cockayne syndrome group B protein enhances elongation by RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

The structure and function of RAD6 and RAD18 DNA repair genes of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629578

21 June 2018

DNA damage-induced Def1-RNA polymerase II interaction and Def1 requirement for polymerase ubiquitylation in vitro.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

Screening the yeast "disruptome" for mutants affecting resistance to the immunosuppressive drug, mycophenolic acid

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

A posttranscriptional role for the yeast Paf1-RNA polymerase II complex is revealed by identification of primary targets.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

Histone acetylation, chromatin remodelling, transcription and nucleotide excision repair in S. cerevisiae: studies with two model genes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

Phenotypic analysis of Paf1/RNA polymerase II complex mutations reveals connections to cell cycle regulation, protein synthesis, and lipid and nucleic acid metabolism

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1000364

21 January 2018

A simple in vivo assay for measuring the efficiency of gene length-dependent processes in yeast mRNA biogenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19197357

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PGEN.1000364

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19197357%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19197357%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19197357%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

ResearchGate publication ID

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