(Q34173996)

31 July 2017

title

Detection of interacting transcription factors in human tissues using predicted DNA binding affinity (English)

1 reference

31 July 2017

2

Martin Vingron

1 reference

31 July 2017

1

Alena Myšičková

1 reference

31 July 2017

language of work or name

English

0 references

publication date

17 January 2012

1 reference

31 July 2017

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31 July 2017

volume

13 Suppl 1

1 reference

31 July 2017

page(s)

S2

1 reference

The BioGRID Interaction Database: 2011 update

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583127

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5 July 2018

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An atlas of combinatorial transcriptional regulation in mouse and man

5 July 2018

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Identification of interacting transcription factors regulating tissue gene expression in human

5 July 2018

1 reference

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5 July 2018

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Nuclear architecture and gene regulation

5 July 2018

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Integrated approaches to uncovering transcription regulatory networks in mammalian cells

5 July 2018

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JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

5 July 2018

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Genome-wide mapping of in vivo protein-DNA interactions

5 July 2018

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Tissue-specific regulatory elements in mammalian promoters

5 July 2018

1 reference

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Computational analysis of tissue-specific combinatorial gene regulation: predicting interaction between transcription factors in human tissues

5 July 2018

1 reference

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Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae

5 July 2018

1 reference

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TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

5 July 2018

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Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays

5 July 2018

1 reference

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Cell-type-specific transcriptomics in chimeric models using transcriptome-based masks

5 July 2018

1 reference

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Vascular endothelial growth factor- and thrombin-induced termination factor, Down syndrome critical region-1, attenuates endothelial cell proliferation and angiogenesis

5 July 2018

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Control of pancreas and liver gene expression by HNF transcription factors

5 July 2018

1 reference

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Role and regulation of the thrombin receptor (PAR-1) in human melanoma

5 July 2018

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Assessing experimentally derived interactions in a small world

5 July 2018

1 reference

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The role of basal and myogenic factors in the transcriptional activation of utrophin promoter A: implications for therapeutic up-regulation in Duchenne muscular dystrophy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583127

Protein-protein interaction panel using mouse full-length cDNAs

5 July 2018

1 reference

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A predictive model for regulatory sequences directing liver-specific transcription.

5 July 2018

1 reference

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Initial sequencing and analysis of the human genome

5 July 2018

1 reference

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Activator protein-2 mediates transcriptional activation of the CYP11A1 gene by interaction with Sp1 rather than binding to DNA.

5 July 2018

1 reference

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5 July 2018

1 reference

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DNA binding by MADS-box transcription factors: a molecular mechanism for differential DNA bending

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583127

Orphan receptor HNF-4 and bZip protein C/EBP alpha bind to overlapping regions of the apolipoprotein B gene promoter and synergistically activate transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583127

Statistical detection of cooperative transcription factors with similarity adjustment

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S1-S2

Predicting transcription factor affinities to DNA from a biophysical model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S1-S2

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S1-S2

Correlating Protein–DNA and Protein–Protein Interaction Networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S1-S2

Using transcription factor binding site co-occurrence to predict regulatory regions

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22369666

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

GeneNest: automated generation and visualization of gene indices

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22369666

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-13-S1-S2

1 reference

journals/bmcgenomics/MysickovaV12

31 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

31 July 2017

1 reference