(Q34440056)

2 August 2017

title

TORC2-dependent protein kinase Ypk1 phosphorylates ceramide synthase to stimulate synthesis of complex sphingolipids (English)

1 reference

2 August 2017

0 references

1 reference

1 reference

Alexander Muir

1

0 references

Jeremy Thorner

object named as

Jeremy Thorner

5

0 references

author name string

Subramaniam Ramachandran

2

1 reference

2 August 2017

Françoise M Roelants

3

1 reference

2 August 2017

Garrett Timmons

4

1 reference

2 August 2017

language of work or name

English

0 references

publication date

3 October 2014

1 reference

2 August 2017

1 reference

2 August 2017

volume

3

1 reference

Atg1 kinase organizes autophagosome formation by phosphorylating Atg9.

2 August 2017

cites work

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6 July 2018

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TOR complex 2-Ypk1 signaling maintains sphingolipid homeostasis by sensing and regulating ROS accumulation

6 July 2018

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6 July 2018

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The protein kinase Sch9 is a key regulator of sphingolipid metabolism in Saccharomyces cerevisiae.

6 July 2018

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Re-annotation of protein-coding genes in the genome of saccharomyces cerevisiae based on support vector machines.

6 July 2018

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A calcineurin-dependent switch controls the trafficking function of α-arrestin Aly1/Art6.

6 July 2018

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Coordination of rapid sphingolipid responses to heat stress in yeast

6 July 2018

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The PhosphoGRID Saccharomyces cerevisiae protein phosphorylation site database: version 2.0 update

6 July 2018

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Vps9 family protein Muk1 is the second Rab5 guanosine nucleotide exchange factor in budding yeast

6 July 2018

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Sphingolipid homeostasis in the endoplasmic reticulum and beyond

6 July 2018

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Functional characterization of Aspergillus nidulans ypkA, a homologue of the mammalian kinase SGK

6 July 2018

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TORC1-regulated protein kinase Npr1 phosphorylates Orm to stimulate complex sphingolipid synthesis.

6 July 2018

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Plasma membrane proteins Slm1 and Slm2 mediate activation of the AGC kinase Ypk1 by TORC2 and sphingolipids in S. cerevisiae

6 July 2018

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Sphingolipid signaling mediates iron toxicity

6 July 2018

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Modulation of ceramide synthase activity via dimerization

6 July 2018

1 reference

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Orm protein phosphoregulation mediates transient sphingolipid biosynthesis response to heat stress via the Pkh-Ypk and Cdc55-PP2A pathways

6 July 2018

1 reference

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YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit.

6 July 2018

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Regulation of sphingolipid synthesis through Orm1 and Orm2 in yeast

6 July 2018

1 reference

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Plasma membrane recruitment and activation of the AGC kinase Ypk1 is mediated by target of rapamycin complex 2 (TORC2) and its effector proteins Slm1 and Slm2.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs

6 July 2018

1 reference

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A molecular switch on an arrestin-like protein relays glucose signaling to transporter endocytosis

6 July 2018

1 reference

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Target of rapamycin complex 2 signals to downstream effector yeast protein kinase 2 (Ypk2) through adheres-voraciously-to-target-of-rapamycin-2 protein 1 (Avo1) in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Target of rapamycin (TOR) in nutrient signaling and growth control

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

TORC1 regulates endocytosis via Npr1-mediated phosphoinhibition of a ubiquitin ligase adaptor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Protein kinase Ypk1 phosphorylates regulatory proteins Orm1 and Orm2 to control sphingolipid homeostasis in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Ceramides as modulators of cellular and whole-body metabolism

6 July 2018

1 reference

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mSIN1 protein mediates SGK1 protein interaction with mTORC2 protein complex and is required for selective activation of the epithelial sodium channel

6 July 2018

1 reference

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Membrane organization and lipid rafts

6 July 2018

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Endocytosis and signaling

6 July 2018

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Rab-Family GTPase Regulates TOR Complex 2 Signaling in Fission Yeast

6 July 2018

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Membranes in balance: mechanisms of sphingolipid homeostasis

6 July 2018

1 reference

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Molecular mechanisms in signal transduction at the membrane

6 July 2018

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MOTIPS: automated motif analysis for predicting targets of modular protein domains

6 July 2018

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Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs

6 July 2018

1 reference

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The nuts and bolts of AGC protein kinases

6 July 2018

1 reference

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Cracking the phosphatase code: docking interactions determine substrate specificity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

A protein kinase network regulates the function of aminophospholipid flippases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Close encounters of the oily kind: regulation of transporters by lipids

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Phosphorylation of the tumor suppressor CYLD by the breast cancer oncogene IKKepsilon promotes cell transformation

6 July 2018

1 reference

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6 July 2018

1 reference

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Stress resistance and signal fidelity independent of nuclear MAPK function

6 July 2018

1 reference

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AMPK phosphorylation of raptor mediates a metabolic checkpoint

6 July 2018

1 reference

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The chemical genomic portrait of yeast: uncovering a phenotype for all genes

6 July 2018

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Thematic review series: sphingolipids. New insights into sphingolipid metabolism and function in budding yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Regulation of ceramide biosynthesis by TOR complex 2.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Fission yeast TOR complex 2 activates the AGC-family Gad8 kinase essential for stress resistance and cell cycle control.

6 July 2018

1 reference

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LIPID MAPS online tools for lipid research

6 July 2018

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Systematic Discovery of In Vivo Phosphorylation Networks

6 July 2018

1 reference

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Metabolism and biological functions of two phosphorylated sphingolipids, sphingosine 1-phosphate and ceramide 1-phosphate

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Specificity profiling of Pak kinases allows identification of novel phosphorylation sites

6 July 2018

1 reference

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A conserved docking site modulates substrate affinity for calcineurin, signaling output, and in vivo function

6 July 2018

1 reference

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Chemical genetics reveals the requirement for Polo-like kinase 1 activity in positioning RhoA and triggering cytokinesis in human cells.

6 July 2018

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Evolution of Ime2 phosphorylation sites on Cdk1 substrates provides a mechanism to limit the effects of the phosphatase Cdc14 in meiosis

6 July 2018

1 reference

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The yeast PH domain proteins Slm1 and Slm2 are targets of sphingolipid signaling during the response to heat stress.

6 July 2018

1 reference

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Identification of Sin1 as an essential TORC2 component required for complex formation and kinase activity

6 July 2018

1 reference

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SIN1/MIP1 maintains rictor-mTOR complex integrity and regulates Akt phosphorylation and substrate specificity

6 July 2018

1 reference

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Ysp2 mediates death of yeast induced by amiodarone or intracellular acidification

6 July 2018

1 reference

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Mutual antagonism of target of rapamycin and calcineurin signaling

6 July 2018

1 reference

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The phosphatidylinositol 4,5-biphosphate and TORC2 binding proteins Slm1 and Slm2 function in sphingolipid regulation

6 July 2018

1 reference

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Transmembrane topology of ceramide synthase in yeast

6 July 2018

1 reference

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Introduction to the membrane protein reviews: the interplay of structure, dynamics, and environment in membrane protein function

6 July 2018

1 reference

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Slm1 and slm2 are novel substrates of the calcineurin phosphatase required for heat stress-induced endocytosis of the yeast uracil permease.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Mapping pathways and phenotypes by systematic gene overexpression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Substrate specificity analysis of protein kinase complex Dbf2-Mob1 by peptide library and proteome array screening

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species

6 July 2018

1 reference

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Tor2 directly phosphorylates the AGC kinase Ypk2 to regulate actin polarization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Lip1p: a novel subunit of acyl-CoA ceramide synthase

6 July 2018

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PDK1, the master regulator of AGC kinase signal transduction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

SLI1 (YGR212W) is a major gene conferring resistance to the sphingolipid biosynthesis inhibitor ISP-1, and encodes an ISP-1 N-acetyltransferase in yeast

6 July 2018

1 reference

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Sphingosine-1-phosphate: an enigmatic signalling lipid

6 July 2018

1 reference

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Ceramide/long-chain base phosphate rheostat in Saccharomyces cerevisiae: regulation of ceramide synthesis by Elo3p and Cka2p

6 July 2018

1 reference

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Targeting the MEF2-like transcription factor Smp1 by the stress-activated Hog1 mitogen-activated protein kinase

6 July 2018

1 reference

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Pkh1 and Pkh2 differentially phosphorylate and activate Ypk1 and Ykr2 and define protein kinase modules required for maintenance of cell wall integrity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Identification of the tuberous sclerosis complex-2 tumor suppressor gene product tuberin as a target of the phosphoinositide 3-kinase/akt pathway

6 July 2018

1 reference

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The conserved Pkh-Ypk kinase cascade is required for endocytosis in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Lag1p and Lac1p are essential for the Acyl-CoA-dependent ceramide synthase reaction in Saccharomyces cerevisae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

The initial step of the glycerolipid pathway: identification of glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate acyltransferases in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

A motif-based profile scanning approach for genome-wide prediction of signaling pathways

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Accumulation of phosphorylated sphingoid long chain bases results in cell growth inhibition in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Two endoplasmic reticulum (ER) membrane proteins that facilitate ER-to-Golgi transport of glycosylphosphatidylinositol-anchored proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Yeast calcineurin regulates nuclear localization of the Crz1p transcription factor through dephosphorylation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Functional counterparts of mammalian protein kinases PDK1 and SGK in budding yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Homologs of the yeast longevity gene LAG1 in Caenorhabditis elegans and human

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Differential regulation of transcription: repression by unactivated mitogen-activated protein kinase Kss1 requires the Dig1 and Dig2 proteins.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

The Saccharomyces cerevisiae TSC10/YBR265w gene encoding 3-ketosphinganine reductase is identified in a screen for temperature-sensitive suppressors of the Ca2+-sensitive csg2Delta mutant

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

The LCB4 (YOR171c) and LCB5 (YLR260w) genes of Saccharomyces encode sphingoid long chain base kinases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Sphingoid base 1-phosphate phosphatase: a key regulator of sphingolipid metabolism and stress response.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

The two isoenzymes for yeast NAD+-dependent glycerol 3-phosphate dehydrogenase encoded by GPD1 and GPD2 have distinct roles in osmoadaptation and redox regulation

6 July 2018

1 reference

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Sphingolipid synthesis as a target for antifungal drugs. Complementation of the inositol phosphorylceramide synthase defect in a mutant strain of Saccharomyces cerevisiae by the AUR1 gene

6 July 2018

1 reference

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The AUR1 gene in Saccharomyces cerevisiae encodes dominant resistance to the antifungal agent aureobasidin A (LY295337).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

The FPS1 gene product functions as a glycerol facilitator in the yeast Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Plasma membrane stress induces relocalization of Slm proteins and activation of TORC2 to promote sphingolipid synthesis.

6 July 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

Essential, completely conserved glycine residue in the domain III S2-S3 linker of voltage-gated calcium channel alpha1 subunits in yeast and mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

EbEST: an automated tool using expressed sequence tags to delineate gene structure

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

Separation and detection of large phosphoproteins using Phos-tag SDS-PAGE.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

Reciprocal phosphorylation of yeast glycerol-3-phosphate dehydrogenases in adaptation to distinct types of stress

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

Sin1 phosphorylation impairs mTORC2 complex integrity and inhibits downstream Akt signalling to suppress tumorigenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

Differential roles of PDK1- and PDK2-phosphorylation sites in the yeast AGC kinases Ypk1, Pkc1 and Sch9.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

TORC2 signaling pathway guarantees genome stability in the face of DNA strand breaks.

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

TORC1 inhibits GSK3-mediated Elo2 phosphorylation to regulate very long chain fatty acid synthesis and autophagy

21 January 2018

1 reference

https://api.crossref.org/works/10.7554%2FELIFE.03779

(1)H, (15)N and (13)C resonance assignments of the conserved region in the middle domain of S. pombe Sin1 protein.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4217029

Isolation and characterization of novel inhibitors of sphingolipid synthesis: australifungin, viridiofungins, rustmicin, and khafrefungin

27 October 2018

1 reference

12 December 2020

Roles for Sphingolipid Biosynthesis in Mediation of Specific Programs of the Heat Stress Response Determined through Gene Expression Profiling

1 reference

12 December 2020

The extraction of inositol-containing phospholipids and phosphatidylcholine from Saccharomyces cerevisiae and Neurospora crassa

1 reference

12 December 2020

Involvement of yeast sphingolipids in the heat stress response of Saccharomyces cerevisiae

1 reference

12 December 2020

Identifiers

DOI

10.7554/ELIFE.03779

1 reference

2 August 2017

1 reference

2 August 2017

1 reference