(Q35004344)

5 August 2017

Pervasive transcription of the eukaryotic genome: functional indices and conceptual implications (English)

1 reference

5 August 2017

1

1 reference

5 August 2017

4

1 reference

5 August 2017

Paulo P Amaral

2

0 references

author name string

Timothy R Mercer

series ordinal

3

1 reference

5 August 2017

21 September 2009

1 reference

Briefings in functional genomics & proteomics

5 August 2017

1 reference

5 August 2017

8

1 reference

5 August 2017

407-423

1 reference

5 August 2017

6

1 reference

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

5 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The transcriptional landscape of the mammalian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA maps reveal new RNA classes and a possible function for pervasive transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Antisense transcription in the mammalian transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Prominent use of distal 5' transcription start sites and discovery of a large number of additional exons in ENCODE regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A strategy for probing the function of noncoding RNAs finds a repressor of NFAT

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Biological function of unannotated transcription during the early development of Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Short homologous sequences are strongly associated with the generation of chimeric RNAs in eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcription-mediated gene fusion in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Tentative mapping of transcription-induced interchromosomal interaction using chimeric EST and mRNA data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Chimeric transcript discovery by paired-end transcriptome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification of mammalian microRNA host genes and transcription units

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

SnoRNP biogenesis meets Pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Tiny RNAs associated with transcription start sites in animals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Small RNAs derived from snoRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Intronic microRNA precursors that bypass Drosha processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Waste not, want not--transcript excess in multicellular eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcriptional noise and the fidelity of initiation by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Replication and transcription: shaping the landscape of the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A new paradigm for developmental biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA regulation of epigenetic processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Specific expression of long noncoding RNAs in the mouse brain

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genome-Wide Identification of Long Noncoding RNAs in CD8+ T Cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The genetic signatures of noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genomic and proteomic comparisons between bacterial and archaeal genomes and related comparisons with the yeast and fly genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Complex Loci in human and mouse genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Small increases in the level of Sox2 trigger the differentiation of mouse embryonic stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

NRED: a database of long noncoding RNA expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA exosome depletion reveals transcription upstream of active human promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Process or perish: quality control in mRNA biogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA-quality control by the exosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A role for noncoding transcription in activation of the yeast PHO5 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Trans-acting antisense RNAs mediate transcriptional gene cosuppression in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

NMD: multitasking between mRNA surveillance and modulation of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Nuclear mRNA degradation pathway(s) are implicated in Xist regulation and X chromosome inactivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Ripples from neighbouring transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcriptional interference: an unexpected layer of complexity in gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

High-resolution profiling of histone methylations in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Chromatin modifications and their function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcription is required for establishment of germline methylation marks at imprinted genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Silencing by imprinted noncoding RNAs: is transcription the answer?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Comparative genomics beyond sequence-based alignments: RNA structures in the ENCODE regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Ultraconserved Elements in the Human Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Large-Scale Appearance of Ultraconserved Elements in Tetrapod Genomes and Slowdown of the Molecular Clock

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Conserved introns reveal novel transcripts in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Comparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Raising the estimate of functional human sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Evolutionary turnover of mammalian transcription start sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Evidence for turnover of functional noncoding DNA in mammalian genome evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Heterotachy in mammalian promoter evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Forces shaping the fastest evolving regions in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

An RNA gene expressed during cortical development evolved rapidly in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Silencing of the mammalian X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The non-coding Air RNA is required for silencing autosomal imprinted genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Comparative analysis of Alu repeats in primate genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A novel class of developmentally regulated noncoding RNAs in Leishmania

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Novel non-coding RNAs in Dictyostelium discoideum and their expression during development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA-mediated epigenetic programming of a genome-rearrangement pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transposable elements and an epigenetic basis for punctuated equilibria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transposable elements: powerful facilitators of evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Analysis of the platypus genome suggests a transposon origin for mammalian imprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Extensive demethylation of repetitive elements during seed development underlies gene imprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Ubiquitous, interspersed repeated sequences in mammalian genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Finishing the euchromatic sequence of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Conserved eukaryotic transposable elements and the evolution of gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The regulated retrotransposon transcriptome of mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Useful 'junk': Alu RNAs in the human transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcription and RNAi in heterochromatic gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

LINE retrotransposon RNA is an essential structural and functional epigenetic component of a core neocentromeric chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Generation of neuronal variability and complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Developmentally regulated activation of a SINE B2 repeat as a domain boundary in organogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Noncoding RNA in development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Transcriptional silencing and promoter methylation triggered by double-stranded RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Post-transcriptional small RNA pathways in plants: mechanisms and regulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Targets of RNA-directed DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A position effect on the heritability of epigenetic silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

An epigenetic role for maternally inherited piRNAs in transposon silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Noncoding RNAs and intranuclear positioning in monoallelic gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Paramutation: from maize to mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genetic mapping in human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification of a novel non-coding RNA, MIAT, that confers risk of myocardial infarction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Characterization of a germ-line deletion, including the entire INK4/ARF locus, in a melanoma-neural system tumor family: identification of ANRIL, an antisense noncoding RNA whose expression coclusters with ARF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

SNPs in the promoter of a B cell-specific antisense transcript, SAS-ZFAT, determine susceptibility to autoimmune thyroid disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The Eukaryotic Genome as an RNA Machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Long intronic noncoding RNA transcription: expression noise or expression choice?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

An abundance of bidirectional promoters in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Analysis of a new homozygous deletion in the tumor suppressor region at 3p12.3 reveals two novel intronic noncoding RNA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Noncoding human Y RNAs are overexpressed in tumours and required for cell proliferation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

MALAT-1, a novel noncoding RNA, and thymosin beta4 predict metastasis and survival in early-stage non-small cell lung cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The spinocerebellar ataxia 8 noncoding RNA causes neurodegeneration and associates with staufen in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Long, abundantly expressed non-coding transcripts are altered in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Large-scale transcriptome analyses reveal new genetic marker candidates of head, neck, and thyroid cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

A myelopoiesis-associated regulatory intergenic noncoding RNA transcript within the human HOXA cluster

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Endogenous Msx1 antisense transcript: in vivo and in vitro evidences, structure, and potential involvement in skeleton development in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Expression of trunk Hox genes in the centipede Strigamia maritima: sense and anti-sense transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Developmental regulation of EVF-1, a novel non-coding RNA transcribed upstream of the mouse Dlx6 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The mRNA-like noncoding RNA Gomafu constitutes a novel nuclear domain in a subset of neurons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The noncoding RNA taurine upregulated gene 1 is required for differentiation of the murine retina

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

MicroRNA expression profiles classify human cancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Clusters of internally primed transcripts reveal novel long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA-dependent recruitment of the origin recognition complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Noncoding transcription controls downstream promoters to regulate T-cell receptor alpha recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

21 January 2018

X inactivation Xplained

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Having it both ways: transcription factors that bind DNA and RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Epigenetic spreading of the Drosophila dosage compensation complex from roX RNA genes into flanking chromatin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNA is an integral component of chromatin that contributes to its structural organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Noncoding RNAs of trithorax response elements recruit Drosophila Ash1 to Ultrabithorax

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Unraveling the organization of the internal nuclear matrix: RNA-dependent anchoring of NuMA to a lamin scaffold

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Long non-coding RNAs: insights into functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Regulatory RNAs in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

RNAdb 2.0--an expanded database of mammalian non-coding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Differentiating protein-coding and noncoding RNA: challenges and ambiguities

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The product of the H19 gene may function as an RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The H19 gene: regulation and function of a non-coding RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

What is a gene, post-ENCODE? History and updated definition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Challenging the dogma: the hidden layer of non‐protein‐coding RNAs in complex organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Genome-wide analysis of mammalian promoter architecture and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Origin of phenotypes: genes and transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

EST analyses predict the existence of a population of chimeric microRNA precursor-mRNA transcripts expressed in normal human and mouse tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

High frequency trans-splicing in a cell line producing spliced and polyadenylated RNA polymerase I transcripts from an rDNA-myc chimeric gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Non-coding RNAs: the architects of eukaryotic complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

The relationship between non-protein-coding DNA and eukaryotic complexity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Noncoding RNAs and RNA editing in brain development, functional diversification, and neurological disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

Non-coding RNAs and new opportunities for the private sector

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBFGP%2FELP038

21 January 2018

Identifiers

DOI

10.1093/BFGP/ELP038

1 reference

5 August 2017

1 reference

PubMed ID

19770204