(Q35039372)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Comparative genomics reveals candidate carotenoid pathway regulators of ripening watermelon fruit (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Je Min Lee

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Yi Zheng

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

Marcello Salvatore Lenucci

29 February 2020

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

author name string

Stefania Grassi

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Zhangjun Fei

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Giuseppe Dalessandro

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

James J Giovannoni

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

language of work or name

English

0 references

publication date

12 November 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

volume

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

page(s)

781

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

29 February 2020

limma

object named as

LIMMA

2 references

22 June 2022

https://europepmc.org/article/PMC/3840736

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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8 July 2018

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Lycopene prevention of oxysterol-induced proinflammatory cytokine cascade in human macrophages: inhibition of NF-κB nuclear binding and increase in PPARγ expression

8 July 2018

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8 July 2018

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Functional diversification of AGAMOUS lineage genes in regulating tomato flower and fruit development.

8 July 2018

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Source to sink: regulation of carotenoid biosynthesis in plants.

8 July 2018

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TOMATO AGAMOUS-LIKE 1 is a component of the fruit ripening regulatory network

8 July 2018

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Fleshy fruit expansion and ripening are regulated by the Tomato SHATTERPROOF gene TAGL1

8 July 2018

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Unravelling the regulatory mechanisms that modulate the MEP pathway in higher plants

8 July 2018

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TopHat: discovering splice junctions with RNA-Seq

8 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

8 July 2018

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Genetic engineering of carotenoid formation in tomato fruit and the potential application of systems and synthetic biology approaches

8 July 2018

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Carotenoid metabolism: biosynthesis, regulation, and beyond

8 July 2018

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Gene expression in developing watermelon fruit

8 July 2018

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A tomato HD-Zip homeobox protein, LeHB-1, plays an important role in floral organogenesis and ripening

8 July 2018

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Metabolic engineering of carotenoid biosynthesis in plants

8 July 2018

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Transcriptional profiling of high pigment-2dg tomato mutant links early fruit plastid biogenesis with its overproduction of phytonutrients

8 July 2018

1 reference

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Functional identification and differential expression of 1-deoxy-D-xylulose 5-phosphate synthase in induced terpenoid resin formation of Norway spruce (Picea abies).

8 July 2018

1 reference

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Carotenoids and human health

8 July 2018

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Carotenoid accumulation and function in seeds and non-green tissues.

8 July 2018

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

8 July 2018

1 reference

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Plant carotenoid cleavage oxygenases and their apocarotenoid products

8 July 2018

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Carotenoid content of 50 watermelon cultivars

8 July 2018

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The 3-hydroxy-3-methylglutaryl coenzyme-A (HMG-CoA) reductases

8 July 2018

1 reference

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Involvement of ethylene signalling in a non-climacteric fruit: new elements regarding the regulation of ADH expression in grapevine

8 July 2018

1 reference

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Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato

8 July 2018

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GENES AND ENZYMES OF CAROTENOID BIOSYNTHESIS IN PLANTS.

8 July 2018

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Genetic regulation of fruit development and ripening

8 July 2018

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MADS-box genes expressed during tomato seed and fruit development

8 July 2018

1 reference

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Elucidation of the Indirect Pathway of Abscisic Acid Biosynthesis by Mutants, Genes, and Enzymes

8 July 2018

1 reference

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Regulation of carotenoid formation during tomato fruit ripening and development

8 July 2018

1 reference

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Ethylene biosynthesis and action in tomato: a model for climacteric fruit ripening

8 July 2018

1 reference

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Two distantly related genes encoding 1-deoxy-d-xylulose 5-phosphate synthases: differential regulation in shoots and apocarotenoid-accumulating mycorrhizal roots

8 July 2018

1 reference

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Altered cell wall disassembly during ripening of Cnr tomato fruit: implications for cell adhesion and fruit softening.

8 July 2018

1 reference

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Ethylene biosynthesis and signaling networks

8 July 2018

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Cloning of tangerine from tomato reveals a carotenoid isomerase essential for the production of beta-carotene and xanthophylls in plants

8 July 2018

1 reference

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Biosynthesis of the thiazole moiety of thiamin (vitamin B1) in higher plant chloroplasts

8 July 2018

1 reference

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Carotenoid biosynthesis in flowering plants

8 July 2018

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Role of antioxidant lycopene in cancer and heart disease

8 July 2018

1 reference

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A stress-inducible gene for 9-cis-epoxycarotenoid dioxygenase involved in abscisic acid biosynthesis under water stress in drought-tolerant cowpea

8 July 2018

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The 9-cis-epoxycarotenoid cleavage reaction is the key regulatory step of abscisic acid biosynthesis in water-stressed bean

8 July 2018

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A family of transketolases that directs isoprenoid biosynthesis via a mevalonate-independent pathway

8 July 2018

1 reference

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8 July 2018

1 reference

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Arabidopsis carotenoid mutants demonstrate that lutein is not essential for photosynthesis in higher plants

8 July 2018

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Cloning and characterization of the cDNA for lycopene beta-cyclase from tomato reveals decrease in its expression during fruit ripening

8 July 2018

1 reference

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Absorption, metabolism, and transport of carotenoids.

8 July 2018

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An Escherichia coli K-12 tktA tktB mutant deficient in transketolase activity requires pyridoxine (vitamin B6) as well as the aromatic amino acids and vitamins for growth

8 July 2018

1 reference

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Plant carotenoids: pigments for photoprotection, visual attraction, and human health

8 July 2018

1 reference

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Biological actions of carotenoids

8 July 2018

1 reference

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A review of epidemiologic evidence that carotenoids reduce the risk of cancer

8 July 2018

1 reference

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Regulation of the mevalonate pathway

8 July 2018

1 reference

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Single-base resolution methylomes of tomato fruit development reveal epigenome modifications associated with ripening.

8 July 2018

1 reference

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The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions

25 October 2018

1 reference

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The tomato FRUITFULL homologs TDR4/FUL1 and MBP7/FUL2 regulate ethylene-independent aspects of fruit ripening

25 October 2018

1 reference

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Isoprenoid, lipid, and protein contents in intact plastids isolated from mesocarp cells of traditional and high-pigment tomato cultivars at different ripening stages.

25 October 2018

1 reference

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Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals that the ethylene response factor SlERF6 plays an important role in ripening and carotenoid accumulation.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The tomato MADS-box transcription factor RIPENING INHIBITOR interacts with promoters involved in numerous ripening processes in a COLORLESS NONRIPENING-dependent manner.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Transcriptome and metabolite profiling show that APETALA2a is a major regulator of tomato fruit ripening.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

A SQUAMOSA MADS box gene involved in the regulation of anthocyanin accumulation in bilberry fruits

25 October 2018

1 reference

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Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit.

25 October 2018

1 reference

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Enhancement of carotenoid biosynthesis in transplastomic tomatoes by induced lycopene-to-provitamin A conversion.

25 October 2018

1 reference

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Ripening-regulated susceptibility of tomato fruit to Botrytis cinerea requires NOR but not RIN or ethylene

25 October 2018

1 reference

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Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The Arabidopsis thaliana type I Isopentenyl Diphosphate Isomerases are targeted to multiple subcellular compartments and have overlapping functions in isoprenoid biosynthesis

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The carotenoid cleavage dioxygenase 1 enzyme has broad substrate specificity, cleaving multiple carotenoids at two different bond positions

25 October 2018

1 reference

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Abscisic acid deficiency in the tomato mutant high-pigment 3 leading to increased plastid number and higher fruit lycopene content

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Manipulation of phytoene levels in tomato fruit: effects on isoprenoids, plastids, and intermediary metabolism

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The cauliflower Or gene encodes a DnaJ cysteine-rich domain-containing protein that mediates high levels of beta-carotene accumulation

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Metabolic engineering of the mevalonate and non-mevalonate isopentenyl diphosphate-forming pathways for the production of health-promoting isoprenoids in tomato.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Carotenoid cleavage dioxygenase (CmCCD4a) contributes to white color formation in chrysanthemum petals

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

A naturally occurring epigenetic mutation in a gene encoding an SBP-box transcription factor inhibits tomato fruit ripening.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The role of carotenoid cleavage dioxygenases in the regulation of carotenoid profiles during maturation in citrus fruit.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Differential expression of three 1-deoxy-D: -xylulose-5-phosphate synthase genes in rice

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Different ethylene receptors show an increased expression during the ripening of strawberries: does such an increment imply a role for ethylene in the ripening of these non-climacteric fruits?

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The tomato carotenoid cleavage dioxygenase 1 genes contribute to the formation of the flavor volatiles beta-ionone, pseudoionone, and geranylacetone

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Analysis in vitro of the enzyme CRTISO establishes a poly-cis-carotenoid biosynthesis pathway in plants

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Molecular and physiological evidence suggests the existence of a system II-like pathway of ethylene production in non-climacteric Citrus fruit

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Distinct light-mediated pathways regulate the biosynthesis and exchange of isoprenoid precursors during Arabidopsis seedling development.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Increases in cell elongation, plastid compartment size and phytoene synthase activity underlie the phenotype of the high pigment-1 mutant of tomato

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Mevalonic acid partially restores chloroplast and etioplast development in Arabidopsis lacking the non-mevalonate pathway

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

A MADS-box gene necessary for fruit ripening at the tomato ripening-inhibitor (rin) locus

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Effect of the Cnr mutation on carotenoid formation during tomato fruit ripening

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

1-Deoxy-D-xylulose-5-phosphate synthase, a limiting enzyme for plastidic isoprenoid biosynthesis in plants

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-D-xylulose 5-phosphate synthase.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Dedicated roles of plastid transketolases during the early onset of isoprenoid biogenesis in pepper fruits1.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The carotenoids as anti-oxidants--a review

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

Expression profiling of various genes during the fruit development and ripening of mango

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3840736

The Or gene enhances carotenoid accumulation and stability during post-harvest storage of potato tubers

25 October 2018

1 reference

12 December 2020

Effect of the Colorless non-ripening mutation on cell wall biochemistry and gene expression during tomato fruit development and ripening

1 reference

12 December 2020

Functional characterization of the three genes encoding 1-deoxy-D-xylulose 5-phosphate synthase in maize

1 reference

12 December 2020

A tomato (Solanum lycopersicum) APETALA2/ERF gene, SlAP2a, is a negative regulator of fruit ripening

1 reference

12 December 2020

Effects of fruit maturity on watermelon ultrastructure and intracellular lycopene distribution

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-14-781

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

PubMed publication ID

24219562

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24219562%20AND%20SRC:MED&resulttype=core&format=json