(Q35130772)

6 August 2017

title

Over-expression of Arabidopsis AtCHR23 chromatin remodeling ATPase results in increased variability of growth and gene expression (English)

1 reference

6 August 2017

Adam Folta

1

1 reference

6 August 2017

Edouard I Severing

2

1 reference

6 August 2017

Julian Krauskopf

3

1 reference

6 August 2017

Henri van de Geest

4

1 reference

6 August 2017

Jan Verver

5

1 reference

6 August 2017

Jan-Peter Nap

6

1 reference

6 August 2017

Ludmila Mlynarova

7

1 reference

6 August 2017

language of work or name

1 reference

25 March 2014

1 reference

6 August 2017

1 reference

6 August 2017

volume

14

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6 August 2017

page(s)

76

1 reference

describes a project that uses

6 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3987066/fullTextXML

inferred from PubMed Central ID database lookup

DESeq2

object named as

DESeq

DEseq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2229-14-76

0 references

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Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects

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Photosynthetic sucrose acts as cotyledon-derived long-distance signal to control root growth during early seedling development in Arabidopsis

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13 July 2018

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Interplay between gene expression noise and regulatory network architecture

13 July 2018

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Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

13 July 2018

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The RNA silencing enzyme RNA polymerase v is required for plant immunity

13 July 2018

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Seed germination and vigor.

13 July 2018

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Myc roles in hematopoiesis and leukemia

13 July 2018

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Impact of gene expression noise on organismal fitness and the efficacy of natural selection

13 July 2018

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Development and applications of single-cell transcriptome analysis

13 July 2018

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Epigenetic contribution to stress adaptation in plants

13 July 2018

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The CHD3 chromatin remodeler PICKLE and polycomb group proteins antagonistically regulate meristem activity in the Arabidopsis root

13 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Gene regulatory networks and the role of robustness and stochasticity in the control of gene expression

13 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

CONSTANS and the evolutionary origin of photoperiodic timing of flowering.

13 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

From RNA-seq reads to differential expression results

13 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Chromatin regulators as capacitors of interspecies variations in gene expression

13 July 2018

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Chromatin regulators shape the genotype-phenotype map.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Epigenetic reprogramming in plant and animal development

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Differential expression analysis for sequence count data

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Plant phenotypic plasticity in a changing climate.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Gene expression variability within and between human populations and implications toward disease susceptibility

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Analysis of Arabidopsis thaliana root growth kinetics with high temporal and spatial resolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Variability in gene expression underlies incomplete penetrance

13 July 2018

1 reference

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13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Chromatin regulation functions in plant abiotic stress responses

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Quantitative epigenetics: DNA sequence variation need not apply

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

TopHat: discovering splice junctions with RNA-Seq

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Chromatin remodeling in plant development.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

The chromatin remodeler SPLAYED regulates specific stress signaling pathways

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Network hubs buffer environmental variation in Saccharomyces cerevisiae

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Nature, nurture, or chance: stochastic gene expression and its consequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Epigenetic regulation and the variability of gene expression

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Light-regulated transcriptional networks in higher plants

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Unique, shared, and redundant roles for the Arabidopsis SWI/SNF chromatin remodeling ATPases BRAHMA and SPLAYED.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Phenotypic consequences of promoter-mediated transcriptional noise

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Identification of multiple distinct Snf2 subfamilies with conserved structural motifs.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Variation within and among species in gene expression: raw material for evolution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Testing experimental data for univariate normality

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

On the utility of pooling biological samples in microarray experiments

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Composition and functional specificity of SWI2/SNF2 class chromatin remodeling complexes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

The Arabidopsis thaliana SNF2 homolog AtBRM controls shoot development and flowering

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Control of stochasticity in eukaryotic gene expression

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Population genetic variation in gene expression is associated with phenotypic variation in Saccharomyces cerevisiae

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Genome-wide insertional mutagenesis of Arabidopsis thaliana

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Photoperiodism: the coincidental perception of the season

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

PICKLE is a CHD3 chromatin-remodeling factor that regulates the transition from embryonic to vegetative development in Arabidopsis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

High temperature promotes auxin-mediated hypocotyl elongation in Arabidopsis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Arabidopsis chromatin remodeling factor PICKLE interacts with transcription factor HY5 to regulate hypocotyl cell elongation

13 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

The Arabidopsis BRAHMA chromatin-remodeling ATPase is involved in repression of seed maturation genes in leaves

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

Separating parental environment from seed size effects on next generation growth and development in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

Technical advance: spatio-temporal analysis of mitotic activity with a labile cyclin-GUS fusion protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

Cellular basis of hypocotyl growth in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

Dissociation of obesity and impaired glucose disposal in mice overexpressing acyl coenzyme a:diacylglycerol acyltransferase 1 in white adipose tissue

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-14-76

Evidence for an epigenetic mechanism by which Hsp90 acts as a capacitor for morphological evolution.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3987066

Variation in gene expression within and among natural populations

27 September 2018

1 reference

12 December 2020

Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis

1 reference

12 December 2020

Quantitative trait locus analysis of growth-related traits in a new Arabidopsis recombinant inbred population

1 reference

12 December 2020

The SWI/SNF chromatin-remodeling gene AtCHR12 mediates temporary growth arrest in Arabidopsis thaliana upon perceiving environmental stress

1 reference

12 December 2020

The role of chromatin-remodeling factor PKL in balancing osmotic stress responses during Arabidopsis seed germination

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2229-14-76

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference