(Q35664369)

English

Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus

scientific article published on 16 June 2015

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9 August 2017

Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus (English)

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9 August 2017

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Christina A Cuomo

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Hadi Quesneville

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Jared Andrews

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Helene Badouin

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Joelle Amselem

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Sébastien Duplessis

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Sebastien Duplessis

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Bernard Henrissat

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Bernard Henrissat

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9 August 2017

Jonathan M. Goldberg

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Jonathan Goldberg

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Michael H Perlin

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Eric Fontanillas

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Su San Toh

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Zehua Chen

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Sarah Young

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Qiandong Zeng

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Gabriela Aguileta

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Elsa Petit

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Dominique Razeeq

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Michael E Hood

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David J Schultz

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16 June 2015

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461

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9 August 2017

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Creative Commons Attribution 4.0 International

16 June 2015

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edgeR

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi

1 reference

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Full-length transcriptome assembly from RNA-Seq data without a reference genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Degeneration in codon usage within the region of suppressed recombination in the mating-type chromosomes of Neurospora tetrasperma.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Assigning duplication events to relative temporal scales in genome-wide studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

A novel high-affinity sucrose transporter is required for virulence of the plant pathogen Ustilago maydis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Phylogenetic determinants of potential host shifts in fungal pathogens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Transcriptome analysis by strand-specific sequencing of complementary DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Hybrid sterility and inviability in the parasitic fungal species complex Microbotryum.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

RIPCAL: a tool for alignment-based analysis of repeat-induced point mutations in fungal genomic sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Eukaryotic gene prediction using GeneMark.hmm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Cophylogeny of the anther smut fungi and their caryophyllaceous hosts: prevalence of host shifts and importance of delimiting parasite species for inferring cospeciation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

NucPred--predicting nuclear localization of proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Functional genomic analysis supports conservation of function among cellulose synthase-like a gene family members and suggests diverse roles of mannans in plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Phylogenetic evidence of host-specific cryptic species in the anther smut fungus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Repbase Update, a database of eukaryotic repetitive elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

CpG mutation rates in the human genome are highly dependent on local GC content

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Lipid-induced filamentous growth in Ustilago maydis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Automated de novo identification of repeat sequence families in sequenced genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Spatial expression dynamics of Men-9 delineate the third floral whorl in male and female flowers of dioecious Silene latifolia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

The gamma-tubulin-encoding gene from the basidiomycete fungus, Ustilago violacea, has a long 5'-untranslated region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4469406

25 September 2018

Ultrastructural markers and systematics in smut fungi and allied taxa

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1660-8

21 January 2018

Atypical laccase isoenzymes from copper supplemented Pleurotus ostreatus cultures

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1660-8

21 January 2018

Hidden diversity in the non‐caryophyllaceous plant‐parasitic members ofMicrobotryum(Pucciniomycotina: Microbotryales)

1 reference

https://api.crossref.org/works/10.1186%2FS12864-015-1660-8

21 January 2018

Use of Internal Transcribed Spacer Primers and Fungicide Treatments to Study the Anther-Smut Disease, Microbotryum violaceum (=Ustilago violacea), of White Campion Silene alba (=Silene latifolia)

1 reference

https://pubmed.ncbi.nlm.nih.gov/26076695

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of catalytic residues in glyoxal oxidase by targeted mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26076695

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of the floral B-function gene SLM2 in female flowers of Silene latifolia infected with the smut fungus Microbotryum violaceum

1 reference

https://pubmed.ncbi.nlm.nih.gov/26076695

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential expression of mepA, mepC and smtE during growth and development of Microbotryum violaceum

1 reference

https://pubmed.ncbi.nlm.nih.gov/26076695

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

EVOLUTION OF REPRODUCTIVE ISOLATION WITHIN A PARASITIC FUNGAL SPECIES COMPLEX

1 reference

https://pubmed.ncbi.nlm.nih.gov/26076695

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AN EXPERIMENTAL FIELD STUDY OF ANTHER-SMUT DISEASE OF SILENE ALBA CAUSED BY USTILAGO VIOLACEA: GENOTYPIC VARIATION AND DISEASE INCIDENCE.

1 reference

https://pubmed.ncbi.nlm.nih.gov/26076695

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/S12864-015-1660-8

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

9 August 2017

ResearchGate publication ID

0 references

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