(Q35999198)

11 August 2017

Testing the potential of a ribosomal 16S marker for DNA metabarcoding of insects (English)

1 reference

11 August 2017

0 references

4

Alice Valentini

1 reference

Philippe Usseglio-Polatera

11 August 2017

2

Pierre Taberlet

0 references

Eric Coissac

series ordinal

7

object named as

Eric Coissac

0 references

Florian Leese

object named as

Florian Leese

series ordinal

9

0 references

series ordinal

5

object named as

Philippe Usseglio-Polatera

1 reference

11 August 2017

8

Frederic Boyer

1 reference

11 August 2017

3

Tony Dejean

1 reference

11 August 2017

6

Jean-Nicolas Beisel

1 reference

11 August 2017

1

Vasco Elbrecht

1 reference

11 August 2017

19 April 2016

1 reference

11 August 2017

1 reference

11 August 2017

4

1 reference

11 August 2017

e1966

1 reference

Creative Commons Attribution 4.0 International

11 August 2017

start time

19 April 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

From barcodes to genomes: extending the concept of DNA barcoding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Targeted gene enrichment and high-throughput sequencing for environmental biomonitoring: a case study using freshwater macroinvertebrates

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Mitochondrial capture enriches mito-DNA 100 fold, enabling PCR-free mitogenomics biodiversity analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass--Sequence Relationships with an Innovative Metabarcoding Protocol.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Error filtering, pair assembly and error correction for next-generation sequencing reads

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Multiplex sequencing of pooled mitochondrial genomes-a crucial step toward biodiversity analysis using mito-metagenomics.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

UPARSE: highly accurate OTU sequences from microbial amplicon reads

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Environmental monitoring using next generation sequencing: rapid identification of macroinvertebrate bioindicator species

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

A DNA-based registry for all animal species: the barcode index number (BIN) system

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

An emergent science on the brink of irrelevance: a review of the past 8 years of DNA barcoding

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Environmental barcoding: a next-generation sequencing approach for biomonitoring applications using river benthos

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Assessing macroinvertebrate biodiversity in freshwater ecosystems: advances and challenges in DNA-based approaches

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

BLAST+: architecture and applications

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Towards a comprehensive barcode library for arctic life - Ephemeroptera, Plecoptera, and Trichoptera of Churchill, Manitoba, Canada.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

BARCODING: bold: The Barcode of Life Data System (http://www.barcodinglife.org)

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Universal and blocking primer mismatches limit the use of high-throughput DNA sequencing for the quantitative metabarcoding of arthropods.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Practical innovations for high-throughput amplicon sequencing.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4841222

Dispersal and gene flow in free-living marine nematodes

23 September 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

Cutadapt removes adapter sequences from high-throughput sequencing reads

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

High-throughput monitoring of wild bee diversity and abundance via mitogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

Rapid and accurate taxonomic classification of insect (class Insecta) cytochromecoxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

Ephemeroptera, Plecoptera, and Trichoptera fauna of Churchill (Manitoba, Canada): insights into biodiversity patterns from DNA barcoding

21 January 2018

1 reference

https://api.crossref.org/works/10.7717%2FPEERJ.1966

21 January 2018

Identifiers

DOI

10.7717/PEERJ.1966

1 reference

11 August 2017

1 reference

PMC publication ID

4841222

11 August 2017

PubMed publication ID

27114891

1 reference

PMC publication ID

4841222