(Q37924115)

25 August 2017

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title

Conformational propensities and residual structures in unfolded peptides and proteins (English)

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Reinhard Schweitzer-Stenner

25 August 2017

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series ordinal

1

object named as

Reinhard Schweitzer-Stenner

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25 August 2017

publication date

30 August 2011

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25 August 2017

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25 August 2017

volume

8

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25 August 2017

issue

1

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25 August 2017

page(s)

122-133

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What does it mean to be natively unfolded?

25 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Intrinsically disordered protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Flexible nets. The roles of intrinsic disorder in protein interaction networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

The protein trinity--linking function and disorder.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Sequence complexity of disordered protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Analysis of molecular recognition features (MoRFs)

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Comparing function and structure between entire proteomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Protein misfolding, evolution and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Expression of polyalanine stretches induces mitochondrial dysfunction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Highly populated turn conformations in natively unfolded tau protein identified from residual dipolar couplings and molecular simulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Stereochemistry of polypeptide chain configurations

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Revisiting the Ramachandran plot: Hard‐sphere repulsion, electrostatics, and H‐bonding in the α‐helix

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Statistical Mechanical Treatment of Protein Conformation. I. Conformational Properties of Amino Acids in Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Local interactions in bends of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Preferred peptide backbone conformations in the unfolded state revealed by the structure analysis of alanine-based (AXA) tripeptides in aqueous solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Is polyproline II a major backbone conformation in unfolded proteins?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Polyproline II structure in a sequence of seven alanine residues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Conformation of the backbone in unfolded proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Reconciling observations of sequence-specific conformational propensities with the generic polymeric behavior of denatured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Intrinsic propensities of amino acid residues in GxG peptides inferred from amide I' band profiles and NMR scalar coupling constants

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Amino acids with hydrogen-bonding side chains have an intrinsic tendency to sample various turn conformations in aqueous solution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Insights into the structure and dynamics of unfolded proteins from nuclear magnetic resonance

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Conformation of peptide fragments of proteins in aqueous solution: implications for initiation of protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Denatured states of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Direct demonstration of structural similarity between native and denatured eglin C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

The expanded denatured state: an ensemble of conformations trapped in a locally encoded topological space

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Multi-conformational peptide dynamics derived from NMR data: A new search algorithm and its application to antamanide

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Are current molecular dynamics force fields too helical?

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Optimized molecular dynamics force fields applied to the helix-coil transition of polypeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Structural composition of betaI- and betaII-proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Stable conformations of tripeptides in aqueous solution studied by UV circular dichroism spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Conformational changes of trialanine induced by direct interactions between alanine residues and alcohols in binary mixtures of water with glycerol and ethanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Polyproline II helix conformation in a proline-rich environment: a theoretical study

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Further evidence for the absence of polyproline II stretch in the XAO peptide.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Polyproline II conformation is one of many local conformational states and is not an overall conformation of unfolded peptides and proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Unusual compactness of a polyproline type II structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

The alanine-rich XAO peptide adopts a heterogeneous population, including turn-like and polyproline II conformations

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Spin relaxation enhancement confirms dominance of extended conformations in short alanine peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Tripeptides adopt stable structures in water. A combined polarized visible Raman, FTIR, and VCD spectroscopy study

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Distribution of conformations sampled by the central amino acid residue in tripeptides inferred from amide I band profiles and NMR scalar coupling constants

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Populations of the three major backbone conformations in 19 amino acid dipeptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Distinguish protein decoys by using a scoring function based on a new AMBER force field, short molecular dynamics simulations, and the generalized born solvent model

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

The intrinsic conformational propensities of the 20 naturally occurring amino acids and reflection of these propensities in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Discrepancies between conformational distributions of a polyalanine peptide in solution obtained from molecular dynamics force fields and amide I' band profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Solvation Effect on the Conformations of Alanine Dipeptide: Integral Equation Approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Polyproline II propensities from GGXGG peptides reveal an anticorrelation with beta-sheet scales

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Interaction of a tripeptide with cesium perfluorooctanoate micelles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Conformational parameters for amino acids in helical, beta-sheet, and random coil regions calculated from proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Comparison between the phi distribution of the amino acids in the protein database and NMR data indicates that amino acids have various phi propensities in the random coil conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Statistical coil model of the unfolded state: resolving the reconciliation problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

PII structure in the model peptides for unfolded proteins: studies on ubiquitin fragments and several alanine-rich peptides containing QQQ, SSS, FFF, and VVV.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Investigations into sequence and conformational dependence of backbone entropy, inter-basin dynamics and the Flory isolated-pair hypothesis for peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Mimicking the folding pathway to improve homology-free protein structure prediction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Crystallographic analysis of endogenous peptides associated with HLA-DR1 suggests a common, polyproline II-like conformation for bound peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Atomic-level characterization of disordered protein ensembles

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Peptide conformation and protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Mapping the Conformational Landscape of Urea-Denatured Ubiquitin Using Residual Dipolar Couplings

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Local Structural Elements in the Mostly Unstructured Transcriptional Activation Domain of Human p53

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Structure and Dynamics of the Homologous Series of Alanine Peptides: A Joint Molecular Dynamics/NMR Study

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Toward a Description of the Conformations of Denatured States of Proteins. Comparison of a Random Coil Model with NMR Measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Defining Long-Range Order and Local Disorder in Native α-Synuclein Using Residual Dipolar Couplings

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

Structure of Poly-L-Proline

21 January 2018

1 reference

https://api.crossref.org/works/10.1039%2FC1MB05225J

21 January 2018

Identifiers

DOI

10.1039/C1MB05225J

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25 August 2017

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