(Q38009054)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

The proteomic future: where mass spectrometry should be taking us (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

author name string

Ján A Miernyk

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

language of work or name

English

0 references

publication date

1 June 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

volume

444

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

page(s)

169-181

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

Using proteomics to study sexual reproduction in angiosperms.

1 February 2020

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Chemical probes and tandem mass spectrometry: a strategy for the quantitative analysis of proteomes and subproteomes

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Diversification and specialization of HIV protease function during in vitro evolution

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Recent applications in nanoliquid chromatography

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The future of biological mass spectrometry

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Proteome analysis of Edwardsiella ictaluri

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A practical interface for microfluidics and nanoelectrospray mass spectrometry

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Dual-pressure linear ion trap mass spectrometer improving the analysis of complex protein mixtures

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What does the future hold for Top Down mass spectrometry?

21 January 2018

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Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach

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Analysis of intact protein isoforms by mass spectrometry.

21 January 2018

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FT-ICR MS optimization for the analysis of intact proteins

21 January 2018

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Emerging mass spectrometry-based technologies for analyses of chromatin changes: analysis of histones and histone modifications

21 January 2018

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Sub-part-per-million precursor and product mass accuracy for high-throughput proteomics on an electron transfer dissociation-enabled orbitrap mass spectrometer

21 January 2018

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100% protein sequence coverage: a modern form of surrealism in proteomics

21 January 2018

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High-throughput middle-down analysis using an orbitrap

21 January 2018

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Quantitative proteomics in plants: choices in abundance.

21 January 2018

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Quantitation in mass-spectrometry-based proteomics

21 January 2018

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Absolute quantification of the glycolytic pathway in yeast: deployment of a complete QconCAT approach

21 January 2018

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Isobaric protein and peptide quantification: perspectives and issues

21 January 2018

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Species identification and vitamin A level in lutjanid fish implicated in vitamin A poisoning

21 January 2018

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Direct comparison of stable isotope labeling by amino acids in cell culture and spectral counting for quantitative proteomics.

21 January 2018

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Less label, more free: approaches in label-free quantitative mass spectrometry.

21 January 2018

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Enhanced peptide quantification using spectral count clustering and cluster abundance

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

Evaluation of normalization methods on GeLC-MS/MS label-free spectral counting data to correct for variation during proteomic workflows

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

Toward a functional catalog of the plant genome. A survey of genes for lipid biosynthesis

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

Increased power for the analysis of label-free LC-MS/MS proteomics data by combining spectral counts and peptide peak attributes

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

The cell as a collection of protein machines: preparing the next generation of molecular biologists

21 January 2018

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New dimensions in the study of protein complexes using quantitative mass spectrometry

21 January 2018

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How far can we go with structural mass spectrometry of protein complexes?

21 January 2018

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How complete are current yeast and human protein-interaction networks?

21 January 2018

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Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae

21 January 2018

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Yeast two-hybrid, a powerful tool for systems biology

21 January 2018

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Mapping multiprotein complexes by affinity purification and mass spectrometry

21 January 2018

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Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry

21 January 2018

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Identifying components of protein complexes in C. elegans using co-immunoprecipitation and mass spectrometry

21 January 2018

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Roles for the two-hybrid system in exploration of the yeast protein interactome.

21 January 2018

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A protein interaction map of Drosophila melanogaster

21 January 2018

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A map of the interactome network of the metazoan C. elegans

21 January 2018

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Towards the mammalian interactome: Inference of a core mammalian interaction set in mouse

21 January 2018

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Predicting protein-protein interactions in the context of protein evolution

21 January 2018

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The tandem affinity purification (TAP) method: a general procedure of protein complex purification

21 January 2018

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Megadalton complexes in the chloroplast stroma of Arabidopsis thaliana characterized by size exclusion chromatography, mass spectrometry, and hierarchical clustering

21 January 2018

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Electrospray mass spectrometric investigation of the chaperone SecB.

21 January 2018

1 reference

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Biochemical approaches for discovering protein-protein interactions.

21 January 2018

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StavroX--a software for analyzing crosslinked products in protein interaction studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

A new generation of cross-linkers for selective detection by MALDI MS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Subunit architecture of multiprotein assemblies determined using restraints from gas-phase measurements

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Ion mobility mass spectrometry of proteins and protein assemblies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Toward an atomic model of the 26S proteasome

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Applications of a travelling wave-based radio-frequency-only stacked ring ion guide

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Merging molecular electron microscopy and mass spectrometry by carbon film-assisted endoproteinase digestion

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Accuracy of protein-protein binding sites in high-throughput template-based modeling

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

A top-down approach to infer and compare domain-domain interactions across eight model organisms

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

SLiM on Diet: finding short linear motifs on domain interaction interfaces in Protein Data Bank

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

Reflections on charge state distributions, protein structure, and the mystical mechanism of electrospray ionization

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Visualizing the spatial distribution of secondary metabolites produced by marine cyanobacteria and sponges via MALDI-TOF imaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Developments and applications of mass microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Mass microscopy: high-resolution imaging mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Molecular imaging of proteins in tissues by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Enhancement of protein sensitivity for MALDI imaging mass spectrometry after chemical treatment of tissue sections

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

Molecular mass spectrometry imaging in biomedical and life science research.

21 January 2018

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The evolving field of imaging mass spectrometry and its impact on future biological research.

21 January 2018

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Sample preparation issues for tissue imaging by imaging MS.

21 January 2018

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MALDI-in source decay applied to mass spectrometry imaging: a new tool for protein identification

21 January 2018

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Clathrate nanostructures for mass spectrometry

21 January 2018

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Nanostructure-initiator mass spectrometry: a protocol for preparing and applying NIMS surfaces for high-sensitivity mass analysis

21 January 2018

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Nanostructure initiator mass spectrometry: tissue imaging and direct biofluid analysis

21 January 2018

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https://api.crossref.org/works/10.1042%2FBJ20110363

An alternative paper based tissue washing method for mass spectrometry imaging: localized washing and fragile tissue analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

A nanostructure-initiator mass spectrometry-based enzyme activity assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

On-tissue protein identification and imaging by MALDI-ion mobility mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Laserspray ionization, a new method for protein analysis directly from tissue at atmospheric pressure with ultrahigh mass resolution and electron transfer dissociation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Phosphopeptide enrichment with stable spatial coordination on a titanium dioxide coated glass slide

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Liposome-based chemical barcodes for single molecule DNA detection using imaging mass spectrometry.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Optimized localization analysis for single-molecule tracking and super-resolution microscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Protein posttranslational modifications: the chemistry of proteome diversifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Strategy for comprehensive identification of post-translational modifications in cellular proteins, including low abundant modifications: application to glyceraldehyde-3-phosphate dehydrogenase

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Quantitative phosphoproteomics strategies for understanding protein kinase-mediated signal transduction pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Biological signalling activity measurements using mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Large-scale phosphorylation analysis of mouse liver

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Electrostatic repulsion hydrophilic interaction chromatography for isocratic separation of charged solutes and selective isolation of phosphopeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Targeted large-scale analysis of protein acetylation

21 January 2018

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The Three Musketeers of Autophagy: phosphorylation, ubiquitylation and acetylation

21 January 2018

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Lysine acetylation is a widespread protein modification for diverse proteins in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Epigenetics: deciphering its role in diabetes and its chronic complications

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

The emerging complexity of protein ubiquitination

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Post-translational modification by SUMO.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Function and regulation of protein neddylation. 'Protein modifications: beyond the usual suspects' review series

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Regulatory monoubiquitination of phosphoenolpyruvate carboxylase in germinating castor oil seeds.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

A bimolecular affinity purification method under denaturing conditions for rapid isolation of a ubiquitinated protein for mass spectrometry analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Posttranslational modifications of the bovine lens beaded filament proteins filensin and CP49.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Template-based protein modeling: recent methodological advances.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Bioinformatics predictions of localization and targeting

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

The importance of intrinsic disorder for protein phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Sequence and structure-based prediction of eukaryotic protein phosphorylation sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Predicting protein post-translational modifications using meta-analysis of proteome scale data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Musite, a tool for global prediction of general and kinase-specific phosphorylation sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

P3DB: a plant protein phosphorylation database

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Electron transfer dissociation mass spectrometry in proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Proteogenomics: needs and roles to be filled by proteomics in genome annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

A perfect genome annotation is within reach with the proteomics and genomics alliance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Mass spectrometry at the interface of proteomics and genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Discovery and revision of Arabidopsis genes by proteogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

The discovery of novel protein-coding features in mouse genome based on mass spectrometry data

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Proteogenomics to discover the full coding content of genomes: a computational perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Proteogenomics and systems biology: quest for the ultimate missing parts

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

High-throughput proteogenomics of Ruegeria pomeroyi: seeding a better genomic annotation for the whole marine Roseobacter clade.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Proteogenomic analysis of bacteria and archaea: a 46 organism case study

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

OryzaPG-DB: rice proteome database based on shotgun proteogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Addressing the challenge of defining valid proteomic biomarkers and classifiers

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Human biomarker discovery and predictive models for disease progression for idiopathic pneumonia syndrome following allogeneic stem cell transplantation

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Identification of biomarkers for colorectal cancer through proteomics-based approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Multiplex assays for biomarker research and clinical application: translational science coming of age.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Towards clinical proteomics analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Mass spectrometry-based proteomics in biomedical research: emerging technologies and future strategies

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Comparison of effect sizes associated with biomarkers reported in highly cited individual articles and in subsequent meta-analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Improving validation practices in "omics" research

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

A multivariate approach to reveal biomarker signatures for disease classification: application to mass spectral profiles of cerebrospinal fluid from patients with multiple sclerosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Accurate quantification of cardiovascular biomarkers in serum using Protein Standard Absolute Quantification (PSAQ™) and selected reaction monitoring

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Modification site localization scoring: strategies and performance

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

MCAM: multiple clustering analysis methodology for deriving hypotheses and insights from high-throughput proteomic datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

Phosphoproteome Analysis of Fission Yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20110363

MALDI imaging and profiling MS of higher mass proteins from tissue

21 January 2018

1 reference

5 June 2022

https://opencitations.net/index/coci/api/v1/citations/10.1016/J.JASMS.2010.07.011

Identifiers

DOI

10.1042/BJ20110363

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22574775%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

1 reference