(Q38088898)

28 August 2017

title

Specialization from synthesis: how ribosome diversity can customize protein function (English)

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28 August 2017

2

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28 August 2017

Aleksandra Filipovska

series ordinal

1

object named as

Aleksandra Filipovska

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28 August 2017

language of work or name

English

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publication date

26 February 2013

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28 August 2017

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28 August 2017

volume

587

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28 August 2017

issue

8

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28 August 2017

page(s)

1189-1197

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Specialized ribosomes: a new frontier in gene regulation and organismal biology

28 August 2017

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One core, two shells: bacterial and eukaryotic ribosomes.

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rRNA transcription in Escherichia coli

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Intragenomic 16S rDNA divergence in Haloarcula marismortui is an adaptation to different temperatures

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Chimeric rRNAs containing the GTPase centers of the developmentally regulated ribosomal rRNAs of Plasmodium falciparum are functionally distinct

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Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning

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Translation initiation: variations in the mechanism can be anticipated

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A mechanistic overview of translation initiation in eukaryotes

21 January 2018

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Kinetic control of translation initiation in bacteria

21 January 2018

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Initiation of protein synthesis in bacteria

21 January 2018

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Specialized ribosome system: preferential translation of a single mRNA species by a subpopulation of mutated ribosomes in Escherichia coli

21 January 2018

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21 January 2018

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21 January 2018

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A network of orthogonal ribosome x mRNA pairs.

21 January 2018

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21 January 2018

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21 January 2018

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Synthesis of orthogonal transcription-translation networks

21 January 2018

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Natural expansion of the genetic code

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Aminoacyl-tRNA synthesis and translational quality control

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Quality control in tRNA charging

21 January 2018

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Adding new chemistries to the genetic code

21 January 2018

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Expanding the genetic code of Escherichia coli

21 January 2018

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An expanded eukaryotic genetic code

21 January 2018

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Genetic incorporation of unnatural amino acids into proteins in mammalian cells

21 January 2018

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Expanding the genetic code of an animal

21 January 2018

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Expanding the genetic code of Drosophila melanogaster

21 January 2018

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tRNA mimicry in translation termination and beyond

21 January 2018

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Evolved orthogonal ribosomes enhance the efficiency of synthetic genetic code expansion.

21 January 2018

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An expanded genetic code with a functional quadruplet codon

21 January 2018

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Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome

21 January 2018

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21 January 2018

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21 January 2018

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Regulation and function of selenoproteins in human disease

21 January 2018

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21 January 2018

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Distinct genetic code expansion strategies for selenocysteine and pyrrolysine are reflected in different aminoacyl-tRNA formation systems.

21 January 2018

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Dual functions of codons in the genetic code

21 January 2018

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Threading the needle: getting selenocysteine into proteins

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Gene for a novel tRNA species that accepts L-serine and cotranslationally inserts selenocysteine.

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

The many levels of control on bacterial selenoprotein synthesis.

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

From one amino acid to another: tRNA-dependent amino acid biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Selenocysteine tRNA-specific elongation factor SelB is a structural chimaera of elongation and initiation factors

21 January 2018

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Identification of a novel translation factor necessary for the incorporation of selenocysteine into protein

21 January 2018

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Engineered rRNA enhances the efficiency of selenocysteine incorporation during translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Selenocysteine insertion sequence (SECIS)-binding protein 2 alters conformational dynamics of residues involved in tRNA accommodation in 80 S ribosomes

21 January 2018

1 reference

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Ribosomal protein L30 is a component of the UGA-selenocysteine recoding machinery in eukaryotes

21 January 2018

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Selenocysteine in proteins-properties and biotechnological use.

21 January 2018

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Direct visualization of disulfide bonds through diselenide proxies using 77Se NMR spectroscopy

21 January 2018

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An engineered selenocysteine defines a unique class of antibody derivatives

21 January 2018

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Translation initiation with 70S ribosomes: an alternative pathway for leaderless mRNAs

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

An unexpected type of ribosomes induced by kasugamycin: a look into ancestral times of protein synthesis?

21 January 2018

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S1 ribosomal protein and the interplay between translation and mRNA decay

21 January 2018

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Selective translation of leaderless mRNAs by specialized ribosomes generated by MazF in Escherichia coli.

21 January 2018

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Characterization of the interactions within the mazEF addiction module of Escherichia coli.

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Escherichia coli MazF leads to the simultaneous selective synthesis of both "death proteins" and "survival proteins".

21 January 2018

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The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria

21 January 2018

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The ribosome as a platform for co-translational processing, folding and targeting of newly synthesized proteins

21 January 2018

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Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

21 January 2018

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Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA.

21 January 2018

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Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast.

21 January 2018

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The Khd1 protein, which has three KH RNA-binding motifs, is required for proper localization of ASH1 mRNA in yeast

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Functional specificity among ribosomal proteins regulates gene expression

21 January 2018

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https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Drosophila ribosomal protein mutants control tissue growth non-autonomously via effects on the prothoracic gland and ecdysone

21 January 2018

1 reference

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Genetic analysis of RpL38 and RpL5, two minute genes located in the centric heterochromatin of chromosome 2 of Drosophila melanogaster

21 January 2018

1 reference

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Silencing the Drosophila ribosomal protein L14 gene using targeted RNA interference causes distinct somatic anomalies.

21 January 2018

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The gene encoding ribosomal protein S19 is mutated in Diamond-Blackfan anaemia

21 January 2018

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Haploinsufficiency for ribosomal protein genes causes selective activation of p53 in human erythroid progenitor cells

21 January 2018

1 reference

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Ribosomal deficiencies in Diamond-Blackfan anemia impair translation of transcripts essential for differentiation of murine and human erythroblasts

21 January 2018

1 reference

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Many ribosomal protein mutations are associated with growth impairment and tumor predisposition in zebrafish

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Establishing Rps6 hemizygous mice as a model for studying how ribosomal protein haploinsufficiency impairs erythropoiesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Mice with ribosomal protein S19 deficiency develop bone marrow failure and symptoms like patients with Diamond-Blackfan anemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

A transgenic mouse model demonstrates a dominant negative effect of a point mutation in the RPS19 gene associated with Diamond-Blackfan anemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Ribosomal protein L24 defect in belly spot and tail (Bst), a mouse Minute

21 January 2018

1 reference

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Ribosomal protein L29/HIP deficiency delays osteogenesis and increases fragility of adult bone in mice

21 January 2018

1 reference

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The role of L1 stalk-tRNA interaction in the ribosome elongation cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

The structure of the eukaryotic ribosome at 3.0 Å resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Eukaryotic ribosomal protein RPS25 interacts with the conserved loop region in a dicistroviral intergenic internal ribosome entry site

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

A ribosome-specialized translation initiation pathway is required for cap-dependent translation of vesicular stomatitis virus mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Non-canonical translation in RNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Differential utilization of upstream AUGs in the beta-secretase mRNA suggests that a shunting mechanism regulates translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Isolation and identification of short nucleotide sequences that affect translation initiation in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Repeated parallel evolution of minimal rRNAs revealed from detailed comparative analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Reconstructing the evolution of the mitochondrial ribosomal proteome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

MRPS27 is a pentatricopeptide repeat domain protein required for the translation of mitochondrially encoded proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

C7orf30 specifically associates with the large subunit of the mitochondrial ribosome and is involved in translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome

21 January 2018

1 reference

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C7orf30 is necessary for biogenesis of the large subunit of the mitochondrial ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Structural aspects of mitochondrial translational apparatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Structure of a mitochondrial ribosome with minimal RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Structure of the Mammalian Mitochondrial Ribosome Reveals an Expanded Functional Role for Its Component Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

The human mitochondrial transcriptome and the RNA-binding proteins that regulate its expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Germ versus soma decisions: lessons from flies and worms

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Presence of Mitochondrial large Ribosomal RNA Outside Mitochondria in Germ Plasm of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Presence of mitochondria-type ribosomes outside mitochondria in germ plasm of Drosophila embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Role of mitochondrial ribosome-dependent translation in germline formation in Drosophila embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Mechanism of protein biosynthesis in mammalian mitochondria

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

21 January 2018

RNA synthetic biology

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Specificity of the ribosomal A site for aminoacyl-tRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Structured mRNAs regulate translation initiation by binding to the platform of the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

How mutations in tRNA distant from the anticodon affect the fidelity of decoding

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

GTPase activation of elongation factor EF-Tu by the ribosome during decoding

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

rRNA modifications and ribosome function

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Reconstitution of functional 50S ribosomes from in vitro transcripts of Bacillus stearothermophilus 23S rRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

The enzymatic acetylation of E.,coli ribosomal protein L12

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

O-GlcNAc cycling enzymes associate with the translational machinery and modify core ribosomal proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Cell cycle-regulated modification of the ribosome by a variant multiubiquitin chain

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Oxygenase-catalyzed ribosome hydroxylation occurs in prokaryotes and humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

The Crystal Structure of the Signal Recognition Particle in Complex with Its Receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

ASH1 mRNA localization in yeast involves multiple secondary structural elementsand Ash1 protein translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Localization and anchoring of mRNA in budding yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.FEBSLET.2013.02.032

Biological Sciences: Ribosomal Proteins: Variation of the Protein Composition in Escherichia coli Ribosomes as Function of Growth Rate

21 January 2018

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10.1016/J.FEBSLET.2013.02.032

21 January 2018

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DOI

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28 August 2017

1 reference