(Q38220384)

31 August 2017

Functional long-range RNA-RNA interactions in positive-strand RNA viruses (English)

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31 August 2017

Beth L Nicholson

1

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31 August 2017

K Andrew White

series ordinal

2

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31 August 2017

language of work or name

English

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publication date

1 July 2014

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Nature Reviews Microbiology

31 August 2017

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31 August 2017

12

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31 August 2017

7

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31 August 2017

493-504

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https://scigraph.springernature.com/pub.10.1038/nrmicro3288

31 August 2017

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The cap-binding translation initiation factor, eIF4E, binds a pseudoknot in a viral cap-independent translation element

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The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation

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Tombusvirus Y-shaped translational enhancer forms a complex with eIF4F and can be functionally replaced by heterologous translational enhancers

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The 3' proximal translational enhancer of Turnip crinkle virus binds to 60S ribosomal subunits

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A ribosome-binding, 3' translational enhancer has a T-shaped structure and engages in a long-distance RNA-RNA interaction

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Long-distance kissing loop interactions between a 3' proximal Y-shaped structure and apical loops of 5' hairpins enhance translation of Saguaro cactus virus

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Oscillating kissing stem-loop interactions mediate 5' scanning-dependent translation by a viral 3'-cap-independent translation element

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The kissing-loop T-shaped structure translational enhancer of Pea enation mosaic virus can bind simultaneously to ribosomes and a 5' proximal hairpin

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Kissing-loop interaction in the 3' end of the hepatitis C virus genome essential for RNA replication

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West Nile virus genome cyclization and RNA replication require two pairs of long-distance RNA interactions

21 January 2018

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21 January 2018

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21 January 2018

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The 5' and 3' downstream AUG region elements are required for mosquito-borne flavivirus RNA replication

21 January 2018

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21 January 2018

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Core protein-mediated 5'-3' annealing of the West Nile virus genomic RNA in vitro

21 January 2018

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Novel ATP-independent RNA annealing activity of the dengue virus NS3 helicase

21 January 2018

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A 5' RNA element promotes dengue virus RNA synthesis on a circular genome

21 January 2018

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Terminal structures of West Nile virus genomic RNA and their interactions with viral NS5 protein

21 January 2018

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Novel cis-acting element within the capsid-coding region enhances flavivirus viral-RNA replication by regulating genome cyclization

21 January 2018

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A balance between circular and linear forms of the dengue virus genome is crucial for viral replication

21 January 2018

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Differential RNA sequence requirement for dengue virus replication in mosquito and mammalian cells

21 January 2018

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Do RNA viruses require genome cyclisation for replication?

21 January 2018

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Kinetics and functional studies on interaction between the replicase proteins of Tomato Bushy Stunt Virus: requirement of p33:p92 interaction for replicase assembly

21 January 2018

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Specific binding of tombusvirus replication protein p33 to an internal replication element in the viral RNA is essential for replication

21 January 2018

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Defining the roles of cis-acting RNA elements in tombusvirus replicase assembly in vitro

21 January 2018

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Internal RNA Replication Elements are Prevalent in Tombusviridae

21 January 2018

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Nidovirales: evolving the largest RNA virus genome

21 January 2018

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A contemporary view of coronavirus transcription.

21 January 2018

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Identification of a coronavirus transcription enhancer.

21 January 2018

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Gene N proximal and distal RNA motifs regulate coronavirus nucleocapsid mRNA transcription

21 January 2018

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Long-distance RNA-RNA interactions in the coronavirus genome form high-order structures promoting discontinuous RNA synthesis during transcription.

21 January 2018

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Subgenomic mRNA transcription in Tombusviridae

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

An RNA activator of subgenomic mRNA1 transcription in tomato bushy stunt virus

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Regulatory activity of distal and core RNA elements in Tombusvirus subgenomic mRNA2 transcription

21 January 2018

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A complex network of RNA-RNA interactions controls subgenomic mRNA transcription in a tombusvirus

21 January 2018

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Higher-order RNA structural requirements and small-molecule induction of tombusvirus subgenomic mRNA transcription

21 January 2018

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Long-distance base pairing in flock house virus RNA1 regulates subgenomic RNA3 synthesis and RNA2 replication

21 January 2018

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RNA-mediated trans-activation of transcription from a viral RNA.

21 January 2018

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RNA-based regulation of transcription and translation of aureusvirus subgenomic mRNA1.

21 January 2018

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Subgenomic mRNA transcription in tobacco necrosis virus

21 January 2018

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Evidence for a premature termination mechanism of subgenomic mRNA transcription in a carmovirus

21 January 2018

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Molecular crowders and cosolutes promote folding cooperativity of RNA under physiological ionic conditions

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO3288

SHAPE-directed RNA secondary structure prediction

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Long-range architecture in a viral RNA genome

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

In vitro secondary structure of the genomic RNA of satellite tobacco mosaic virus

21 January 2018

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Global organization of a positive-strand RNA virus genome

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

5'-3'-UTR interactions regulate p53 mRNA translation and provide a target for modulating p53 induction after DNA damage

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Base pairing interaction between 5'- and 3'-UTRs controls icaR mRNA translation in Staphylococcus aureus

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Secondary Structure Model of the Last Two Domains of Single-stranded RNA Phage Qβ

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Context-influenced cap-independent translation of Tombusvirus mRNAs in vitro

21 January 2018

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https://api.crossref.org/works/10.1038%2FNRMICRO3288

Role of the RNA2 3' non-translated region of Blackcurrant reversion nepovirus in translational regulation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO3288

Translation mechanisms involving long-distance base pairing interactions between the 5' and 3' non-translated regions and internal ribosomal entry are conserved for both genomic RNAs of Blackcurrant reversion nepovirus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO3288

31 March 2020

Identifiers

DOI

10.1038/NRMICRO3288

1 reference

Dimensions Publication ID

31 August 2017

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