(Q38275663)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

review article

1 reference

title

Promoter or enhancer, what's the difference? Deconstruction of established distinctions and presentation of a unifying model (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

author name string

Robin Andersson

series ordinal

1

1 reference

1 September 2017

language of work or name

English

0 references

publication date

2 December 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

volume

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

page(s)

314-323

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

Expression of a β-globin gene is enhanced by remote SV40 DNA sequences

23 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A lymphocyte-specific cellular enhancer is located downstream of the joining region in immunoglobulin heavy chain genes.

21 January 2018

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Enhancers as information integration hubs in development: lessons from genomics.

21 January 2018

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Looping back to leap forward: transcription enters a new era

21 January 2018

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Functional and mechanistic diversity of distal transcription enhancers

21 January 2018

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https://api.crossref.org/works/10.1002%2FBIES.201400162

Transcriptional enhancers: from properties to genome-wide predictions

21 January 2018

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Enhancer function: new insights into the regulation of tissue-specific gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Deciphering the transcriptional cis-regulatory code

21 January 2018

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https://api.crossref.org/works/10.1002%2FBIES.201400162

Enhancer function: mechanistic and genome-wide insights come together

21 January 2018

1 reference

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Transcription factors: from enhancer binding to developmental control

21 January 2018

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Transcriptional enhancers in animal development and evolution

21 January 2018

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Maintaining cell identity through global control of genomic organization

21 January 2018

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The 3D genome in transcriptional regulation and pluripotency

21 January 2018

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The pluripotent genome in three dimensions is shaped around pluripotency factors

21 January 2018

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Determinants and dynamics of genome accessibility

21 January 2018

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https://api.crossref.org/works/10.1002%2FBIES.201400162

The role of chromatin during transcription

21 January 2018

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https://api.crossref.org/works/10.1002%2FBIES.201400162

Inducible gene expression: diverse regulatory mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Systematic localization of common disease-associated variation in regulatory DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

An integrated map of genetic variation from 1,092 human genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

An atlas of active enhancers across human cell types and tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Chromatin marks identify critical cell types for fine mapping complex trait variants

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

An integrated encyclopedia of DNA elements in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Absence of a simple code: how transcription factors read the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Applied bioinformatics for the identification of regulatory elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Computational identification of active enhancers in model organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Hotspots of transcription factor colocalization in the genome of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Developmental mechanisms and cis-regulatory codes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

HOT regions function as patterned developmental enhancers and have a distinct cis-regulatory signature

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Comparative analysis of regulatory information and circuits across distant species

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Highly conserved non-coding sequences are associated with vertebrate development

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

In vivo enhancer analysis of human conserved non-coding sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Tracing the evolution of lineage-specific transcription factor binding sites in a birth-death framework

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Genome-wide location and function of DNA binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Genome-wide mapping of in vivo protein-DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Comprehensive genome-wide protein-DNA interactions detected at single-nucleotide resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Combinatorial binding predicts spatio-temporal cis-regulatory activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A transcription factor collective defines cardiac cell fate and reflects lineage history

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Combinatorial assembly of developmental stage-specific enhancers controls gene expression programs during human erythropoiesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Different gene regulation strategies revealed by analysis of binding motifs

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Widespread misinterpretable ChIP-seq bias in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Gene regulation by nucleosome positioning

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

High-resolution mapping and characterization of open chromatin across the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Developmental fate and cellular maturity encoded in human regulatory DNA landscapes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Epigenetic signatures distinguish multiple classes of enhancers with distinct cellular functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Recruitment of CBP/p300 by the IFN beta enhanceosome is required for synergistic activation of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Mediator and cohesin connect gene expression and chromatin architecture

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Spatial and temporal recruitment of androgen receptor and its coactivators involves chromosomal looping and polymerase tracking

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Dynamics of enhancer-promoter communication during differentiation-induced gene activation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Large-scale discovery of enhancers from human heart tissue

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

ChIP-seq accurately predicts tissue-specific activity of enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Genomic maps and comparative analysis of histone modifications in human and mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

High-resolution profiling of histone methylations in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Histone modifications at human enhancers reflect global cell-type-specific gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Histone H3K27ac separates active from poised enhancers and predicts developmental state

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A unique chromatin signature uncovers early developmental enhancers in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Distinct and predictive histone lysine acetylation patterns at promoters, enhancers, and gene bodies

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A survey of 6,300 genomic fragments for cis-regulatory activity in the imaginal discs of Drosophila melanogaster

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Genome-wide quantitative enhancer activity maps identified by STARR-seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Highly parallel assays of tissue-specific enhancers in whole Drosophila embryos

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Transcription of the hypersensitive site HS2 enhancer in erythroid cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Chromatin remodeling and extragenic transcription at the MHC class II locus control region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Widespread transcription at neuronal activity-regulated enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A large fraction of extragenic RNA pol II transcription sites overlap enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Initiating RNA polymerase II and TIPs as hallmarks of enhancer activity and tissue-specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Enhancer transcripts mark active estrogen receptor binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Remodeling of the enhancer landscape during macrophage activation is coupled to enhancer transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Discovery of active enhancers through bidirectional expression of short transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Unamplified cap analysis of gene expression on a single-molecule sequencer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Tissue-specific RNA expression marks distant-acting developmental enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Nuclear stability and transcriptional directionality separate functionally distinct RNA species

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

H3K4 tri-methylation provides an epigenetic signature of active enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Uncoupling transcription from covalent histone modification

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Regulation of RNA polymerase II activation by histone acetylation in single living cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

A map of the cis-regulatory sequences in the mouse genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Long-range chromosomal interactions regulate the timing of the transition between poised and active gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Gene loops enhance transcriptional directionality

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Promoter directionality is controlled by U1 snRNP and polyadenylation signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Intragenic enhancers act as alternative promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Enhancers and silencers: an integrated and simple model for their function

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Insulators and promoters: closer than we think

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Shadow enhancers as a source of evolutionary novelty

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Master transcription factors and mediator establish super-enhancers at key cell identity genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Transcription factories: genetic programming in three dimensions

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Comparative genomics of Drosophila and human core promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Defining the status of RNA polymerase at promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

Condensin controls recruitment of RNA polymerase II to achieve nematode X-chromosome dosage compensation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201400162

21 January 2018

Identifiers

DOI

10.1002/BIES.201400162

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25450156%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference