(Q38282014)

1 September 2017

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title

Cutting it close: CRISPR-associated endoribonuclease structure and function (English)

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1 September 2017

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2

Jennifer A Doudna

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1 September 2017

Megan L Hochstrasser

1

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publication date

18 November 2014

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Trends in Biochemical Sciences

1 September 2017

number of pages

9

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based on heuristic

inferred from page(s)

published in

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1 September 2017

volume

40

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1 September 2017

issue

1

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1 September 2017

page(s)

58-66

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In vitro assembly and activity of an archaeal CRISPR-Cas type I-A Cascade interference complex.

1 September 2017

cites work

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Binding and cleavage of CRISPR RNA by Cas6

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Self versus non-self discrimination during CRISPR RNA-directed immunity.

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The impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex

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9 October 2022

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Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and Cleavage

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9 October 2022

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Cas5d processes pre-crRNA and is a member of a larger family of CRISPR RNA endonucleases

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9 October 2022

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CRISPR interference: a structural perspective

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9 October 2022

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Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis

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9 October 2022

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RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions

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9 October 2022

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CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Dimeric CRISPR RNA-guided FokI nucleases for highly specific genome editing

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9 October 2022

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Comparative analysis ofCas6b processing and CRISPR RNA stability.

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Csy4 relies on an unusual catalytic dyad to position and cleave CRISPR RNA

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

RNA-protein analysis using a conditional CRISPR nuclease

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of clustered regularly interspaced short palindromic repeats (crispr)-derived rnas (crrnas) in Haloferax volcanii

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Multiplexed and programmable regulation of gene networks with an integrated RNA and CRISPR/Cas toolkit in human cells.

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Affinity purification of T7 RNA transcripts with homogeneous ends using ARiBo and CRISPR tags

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Recognition and maturation of effector RNAs in a CRISPR interference pathway

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

An RNA-induced conformational change required for CRISPR RNA cleavage by the endoribonuclease Cse3

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Evolutionary conservation of sequence and secondary structures in CRISPR repeats

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

CRISPR-Cas systems in the cyanobacterium Synechocystis sp. PCC6803 exhibit distinct processing pathways involving at least two Cas6 and a Cmr2 protein

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Cas6 specificity and CRISPR RNA loading in a complex CRISPR-Cas system

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Conservation and variability in the structure and function of the Cas5d endoribonuclease in the CRISPR-mediated microbial immune system

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Mechanism of substrate selection by a highly specific CRISPR endoribonuclease

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

RNA-guided genetic silencing systems in bacteria and archaea

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

The three major types of CRISPR-Cas systems function independently in CRISPR RNA biogenesis in Streptococcus thermophilus

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A ruler protein in a complex for antiviral defense determines the length of small interfering CRISPR RNAs

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

An RNA element in human interleukin 6 confers escape from degradation by the gammaherpesvirus SOX protein

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Adapting to new threats: the generation of memory by CRISPR-Cas immune systems

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Characterization of the CRISPR/Cas subtype I-A system of the hyperthermophilic crenarchaeon Thermoproteus tenax

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas System

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

RNA processing enables predictable programming of gene expression

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

The CRISPRs, they are a-changin': how prokaryotes generate adaptive immunity

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

CRISPR-mediated adaptive immune systems in bacteria and archaea

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Recognition and Cleavage of a Nonstructured CRISPR RNA by Its Processing Endoribonuclease Cas6

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Active site plasticity enables metal-dependent tuning of Cas5d nuclease activity in CRISPR-Cas type I-C system

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Two CRISPR-Cas systems in Methanosarcina mazei strain Gö1 display common processing features despite belonging to different types I and III.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

CRISPR-Cas systems: beyond adaptive immunity

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Unravelling the structural and mechanistic basis of CRISPR-Cas systems

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Structure of a dimeric crenarchaeal Cas6 enzyme with an atypical active site for CRISPR RNA processing

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Csy4 is responsible for CRISPR RNA processing in Pectobacterium atrosepticum.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

RNA recognition and cleavage by a splicing endonuclease.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Small CRISPR RNAs guide antiviral defense in prokaryotes

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Evolution and classification of the CRISPR-Cas systems

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Structure of the CRISPR interference complex CSM reveals key similarities with cascade

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/J.TIBS.2014.10.007

Identifiers

DOI

10.1016/J.TIBS.2014.10.007

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1 September 2017

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