(Q38447168)

English

Network analysis and cross species comparison of protein-protein interaction networks of human, mouse and rat cytochrome P450 proteins that degrade xenobiotics.

scientific article published on 19 May 2016

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

Network analysis and cross species comparison of protein-protein interaction networks of human, mouse and rat cytochrome P450 proteins that degrade xenobiotics (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

protein-protein interaction

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based on heuristic

inferred from title

Subbiah Parthasarathy

3

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

author name string

Bagavathy Shanmugam Karthikeyan

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

Mohammad Abdulkader Akbarsha

2

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2 April 2020

publication date

1 June 2016

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2 April 2020

Molecular BioSystems

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

12

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2 April 2020

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2 April 2020

2119-2134

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2 April 2020

The evolution of our understanding of endo-xenobiotic crosstalk and cytochrome P450 regulation and the therapeutic implications.

1 reference

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21 January 2018

The role of cytochrome P450 enzymes in endogenous signalling pathways and environmental carcinogenesis

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

The nature of systems biology

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Structural systems biology: modelling protein interactions.

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Construction and analysis of protein-protein interaction networks

1 reference

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21 January 2018

Detecting protein function and protein-protein interactions from genome sequences

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https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Conservation of gene order: a fingerprint of proteins that physically interact

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21 January 2018

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

1 reference

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21 January 2018

Protein co-evolution, co-adaptation and interactions

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Free-energy distribution of binary protein-protein binding suggests cross-species interactome differences

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

STRING v9.1: protein-protein interaction networks, with increased coverage and integration

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21 January 2018

STRING: known and predicted protein-protein associations, integrated and transferred across organisms

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21 January 2018

Human Protein Reference Database--2009 update

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21 January 2018

DIP: The Database of Interacting Proteins: 2001 update

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21 January 2018

Predictome: a database of putative functional links between proteins

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21 January 2018

Network biology: understanding the cell's functional organization

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21 January 2018

Integrative analysis of ocular complications in atherosclerosis unveils pathway convergence and crosstalk.

1 reference

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21 January 2018

Scale-free networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Topological and functional properties of the small GTPases protein interaction network

1 reference

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21 January 2018

Topology-function conservation in protein-protein interaction networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Phase I to II cross-induction of xenobiotic metabolizing enzymes: a feedforward control mechanism for potential hormetic responses

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Cytochrome P450 networks in chemical space

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Computational methods for the prediction of protein interactions

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

The IntAct molecular interaction database in 2012

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Unequal evolutionary conservation of human protein interactions in interologous networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

MINT, the molecular interaction database: 2012 update

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Network analysis of inflammatory genes and their transcriptional regulators in coronary artery disease

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Human Dopamine Receptors Interaction Network (DRIN): a systems biology perspective on topology, stability and functionality of the network

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Getting connected: analysis and principles of biological networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Computing topological parameters of biological networks.

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Topological analysis and interactive visualization of biological networks and protein structures

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

An algorithm for modularity analysis of directed and weighted biological networks based on edge-betweenness centrality.

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

The topological relationship between the large-scale attributes and local interaction patterns of complex networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

Hierarchical organization of modularity in metabolic networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

A faster algorithm for betweenness centrality*

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

From molecular to modular cell biology

1 reference

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21 January 2018

An automated method for finding molecular complexes in large protein interaction networks

1 reference

https://api.crossref.org/works/10.1039%2FC6MB00210B

21 January 2018

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

1 reference

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21 January 2018

GeneVenn - A web application for comparing gene lists using Venn diagrams

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21 January 2018

Contributions of human enzymes in carcinogen metabolism

1 reference

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21 January 2018

Role of human cytochromes P450 in the metabolic activation of chemical carcinogens and toxins

1 reference

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21 January 2018

Adaptations for the oxidation of polycyclic aromatic hydrocarbons exhibited by the structure of human P450 1A2

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21 January 2018

Role of Cytochrome P450 2C8 in Drug Metabolism and Interactions

1 reference

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21 January 2018

Species differences between mouse, rat, dog, monkey and human CYP-mediated drug metabolism, inhibition and induction

1 reference

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21 January 2018

Interactions of hepatic cytochromes P-450 with steroid hormones. Regioselectivity and stereospecificity of steroid metabolism and hormonal regulation of rat P-450 enzyme expression

1 reference

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21 January 2018

P450 in the rat and man: methods of investigation, substrate specificities and relevance to cancer

1 reference

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21 January 2018

Approaches to deorphanization of human and microbial cytochrome P450 enzymes.

1 reference

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21 January 2018

Dual localization of glutathione S-transferase in the cytosol and mitochondria: implications in oxidative stress, toxicity and disease

1 reference

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21 January 2018

Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes, including nomenclature recommendations for genes, pseudogenes and alternative-splice variants

1 reference

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21 January 2018

Comparisons of catalytic selectivity of cytochrome P450 subfamily enzymes from different species

1 reference

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21 January 2018

Differential selectivity of cytochrome P450 inhibitors against probe substrates in human and rat liver microsomes

1 reference

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21 January 2018

Flexibility of human cytochromes P450: molecular dynamics reveals differences between CYPs 3A4, 2C9, and 2A6, which correlate with their substrate preferences

1 reference

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21 January 2018

Modelling species selectivity in rat and human cytochrome P450 2D enzymes

1 reference

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21 January 2018

Identifiers

10.1039/C6MB00210B

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27194593%20AND%20SRC:MED&resulttype=core&format=json

2 April 2020

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