(Q38591291)

4 September 2017

title

Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates (English)

1 reference

4 September 2017

7

Jean-Nicolas Volff

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author name string

Ian A Warren

1

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4 September 2017

Magali Naville

2

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4 September 2017

Domitille Chalopin

3

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4 September 2017

Perrine Levin

4

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4 September 2017

Chloé Suzanne Berger

5

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4 September 2017

Delphine Galiana

6

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4 September 2017

Jean-Nicolas Volff

7

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4 September 2017

language of work or name

1 reference

22 September 2015

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4 September 2017

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4 September 2017

volume

23

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4 September 2017

issue

3

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4 September 2017

page(s)

505-531

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https://scigraph.springernature.com/pub.10.1007/s10577-015-9493-5

4 September 2017

exact match

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cites work

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MicroRNAs: genomics, biogenesis, mechanism, and function

21 January 2018

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The impact of multiple splice sites in human L1 elements

21 January 2018

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Identification of a placental enhancer for the human leptin gene.

21 January 2018

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Placenta-specific INSL4 expression is mediated by a human endogenous retrovirus element.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The molecular basis of P-M hybrid dysgenesis: the role of the P element, a P-strain-specific transposon family

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Accumulation and rapid decay of non-LTR retrotransposons in the genome of the three-spine stickleback

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements as drivers of genomic and biological diversity in vertebrates

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Comprehensive analysis of microRNA genomic loci identifies pervasive repetitive-element origins

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements in gene regulation and in the evolution of vertebrate genomes

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolution of the mammalian transcription factor binding repertoire via transposable elements

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements as a source of genetic innovation: expression and evolution of a family of retrotransposon-derived neogenes in mammals

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The genomic substrate for adaptive radiation in African cichlid fish

21 January 2018

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https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Repetitive and Non-Repetitive DNA Sequences and a Speculation on the Origins of Evolutionary Novelty

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Allosteric cascade of spliceosome activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Loss of LINE-1 activity in the megabats

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Mutation in a primate-conserved retrotransposon reveals a noncoding RNA as a mediator of infantile encephalopathy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genetic innovation in vertebrates: gypsy integrase genes and other genes derived from transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Using Alu elements as polyadenylation sites: A case of retroposon exaptation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Initial sequencing and comparative analysis of the mouse genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evidence that SIZN1 is a candidate X-linked mental retardation gene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Sizn1 is a novel protein that functions as a transcriptional coactivator of bone morphogenic protein signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

XLMR candidate mouse gene, Zcchc12 (Sizn1) is a novel marker of Cajal-Retzius cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Endogenous retroviruses function as species-specific enhancer elements in the placenta

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Birth of a chimeric primate gene by capture of the transposase gene from a mobile element

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Ancestral capture of syncytin-Car1, a fusogenic endogenous retroviral envelope gene involved in placentation and conserved in Carnivora

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Captured retroviral envelope syncytin gene associated with the unique placental structure of higher ruminants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Retroviral envelope syncytin capture in an ancestrally diverged mammalian clade for placentation in the primitive Afrotherian tenrecs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The evolution of lineage-specific regulatory activities in the human embryonic limb

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements re-wire and fine-tune the transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The evolutionary genetics of speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Characterization and genomic mapping of the ZNF80 locus: expression of this zinc-finger gene is driven by a solitary LTR of ERV9 endogenous retroviral family

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Impact of Alu repeats on the evolution of human p53 binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The tightly regulated promoter of the xanA gene of Aspergillus nidulans is included in a helitron

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Bursts and horizontal evolution of DNA transposons in the speciation of pseudotetraploid salmonids

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Exaptation of transposable elements into novel cis-regulatory elements: is the evidence always strong?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Alu elements: know the SINEs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Alu repeats and human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Noncoding origins of anthropoid traits and a new null model of transposon functionalization

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

RNA-seq reveals transcriptomic shock involving transposable elements reactivation in hybrids of young lake whitefish species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Landscape of transcription in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

LINE-1 amplification accompanies explosive genome repatterning in rodents

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

HTT-DB: horizontally transferred transposable elements database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Systematic classification of non-coding RNAs by epigenomic similarity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Syncytin-A and syncytin-B, two fusogenic placenta-specific murine envelope genes of retroviral origin conserved in Muridae

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The SCAN domain family of zinc finger transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A dual origin of the Xist gene from a protein-coding gene and a set of transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transformation of a transposon into a derived prolactin promoter with function during human pregnancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable element recruitments in the mammalian placenta: impacts and mechanisms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Convergent evolution of endometrial prolactin expression in primates, mice, and elephants through the independent recruitment of transposable elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Adaptive evolution in zinc finger transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Retrofitting the genome: L1 extinction follows endogenous retroviral expansion in a group of muroid rodents

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements and the evolution of regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

DNA transposons and the evolution of eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Convergent evolution of two mammalian neuronal enhancers by sequential exaptation of unrelated retroposons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Most mammalian mRNAs are conserved targets of microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The rapid generation of chimerical genes expanding protein diversity in zebrafish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements as genetic regulatory substrates in early development

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A role for host-parasite interactions in the horizontal transfer of transposons across phyla

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Rampant horizontal transfer of SPIN transposons in squamate reptiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genome-Wide Identification and Classification of MicroRNAs Derived from Repetitive Elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable Elements and DNA Methylation Create in Embryonic Stem Cells Human-Specific Regulatory Sequences Associated with Distal Enhancers and Noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Exaptation of an ancient Alu short interspersed element provides a highly conserved vitamin D-mediated innate immune response in humans and primates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Extinction of LINE-1 activity coincident with a major mammalian radiation in rodents

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Regulation of microRNA biogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Chicken repeat 1 (CR1) elements, which define an ancient family of vertebrate non-LTR retrotransposons, contain two closely spaced open reading frames

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Identification and characterization of an Alu-containing, T-cell-specific enhancer located in the last intron of the human CD8 alpha gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Identification and evolution of the silkworm helitrons and their contribution to transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

p53 responsive elements in human retrotransposons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Alu-mediated inactivation of the human CMP- N-acetylneuraminic acid hydroxylase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Pan-vertebrate comparative genomics unmasks retrovirus macroevolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

ANRIL/CDKN2B-AS shows two-stage clade-specific evolution and becomes conserved after transposon insertions in simians.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Identification of an endogenous retroviral envelope gene with fusogenic activity and placenta-specific expression in the rabbit: a new "syncytin" in a third order of mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The genome of the Western clawed frog Xenopus tropicalis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon--derived family during mouse placentogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Segmental copy number variation shapes tissue transcriptomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transcriptional rewiring of the sex determining dmrt1 gene duplicate by transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolution of the Xenopus piggyBac transposon family TxpB: domesticated and untamed strategies of transposon subfamilies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Alu elements in ANRIL non-coding RNA at chromosome 9p21 modulate atherogenic cell functions through trans-regulation of gene networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Population and evolutionary dynamics of Helitron transposable elements in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The zebrafish reference genome sequence and its relationship to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evidence for genomic rearrangements mediated by human endogenous retroviruses during primate evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Human endogenous retroviral elements as indicators of ectopic recombination events in the primate genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Reversion mutation of ib oculocutaneous albinism to wild-type pigmentation in medaka fish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Jumping the fine LINE between species: horizontal transfer of transposable elements in animals catalyses genome evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The majority of primate-specific regulatory sequences are derived from transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Origins, evolution, and phenotypic impact of new genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The role of genes domesticated from LTR retrotransposons and retroviruses in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable Element Insertions in Long Intergenic Non-Coding RNA Genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Rolling-circle transposons in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Harbinger transposons and an ancient HARBI1 gene derived from a transposase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Self-synthesizing DNA transposons in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolution of the RAG1-RAG2 locus: both proteins came from the same transposon

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Volatile evolution of long noncoding RNA repertoires: mechanisms and biological implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Mobile elements: drivers of genome evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements reveal a stem cell-specific class of long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Vertebrate DNA transposon as a natural mutator: the medaka fish Tol2 element contributes to genetic variation without recognizable traces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Molecular evolution of Bov-B LINEs in vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genome Size and Species Diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Alu-SINE exonization: en route to protein-coding function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Functional persistence of exonized mammalian-wide interspersed repeat elements (MIRs)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements have rewired the core regulatory network of human embryonic stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Rapid turnover of long noncoding RNAs and the evolution of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Functional analysis of the endogenous retroviral promoter of the human endothelin B receptor gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The Opitz syndrome gene Mid1 is transcribed from a human endogenous retroviral promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Population genetics models of competition between transposable element subfamilies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The SET domain protein Metnase mediates foreign DNA integration and links integration to nonhomologous end-joining repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3'-end of genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Regulation of maternal behavior and offspring growth by paternally expressed Peg3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Large-scale analysis of exonized mammalian-wide interspersed repeats in primate genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The human SETMAR protein preserves most of the activities of the ancestral Hsmar1 transposase

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Analysis of 13 cell types reveals evidence for the expression of numerous novel primate- and tissue-specific microRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Human piRNAs are under selection in Africans and repress transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The vast, conserved mammalian lincRNome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Emergence of young human genes after a burst of retroposition in primates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Functional diversification of duplicate genes through subcellular adaptation of encoded proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Location analysis for the estrogen receptor-alpha reveals binding to diverse ERE sequences and widespread binding within repetitive DNA elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Mouse homologue of skin-specific retroviral-like aspartic protease involved in wrinkle formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

SASPase regulates stratum corneum hydration through profilaggrin-to-filaggrin processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Controlling elements and the gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genomic instability within centromeres of interspecific marsupial hybrids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolution of the Australian lungfish (Neoceratodus forsteri) genome: a major role for CR1 and L2 LINE elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Birth and expression evolution of mammalian microRNA genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A fish-specific transposable element shapes the repertoire of p53 target genes in zebrafish

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The emergence of new DNA repeats and the divergence of primates

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Comparative genomics modeling of the NRSF/REST repressor network: from single conserved sites to genome-wide repertoire

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A SINE-derived element constitutes a unique modular enhancer for mammalian diencephalic Fgf8

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The evolution of lncRNA repertoires and expression patterns in tetrapods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A family of transposable elements co-opted into developmental enhancers in the mouse neocortex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Rapid sequence and expression divergence suggest selection for novel function in primate-specific KRAB-ZNF genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Deletion of Peg10, an imprinted gene acquired from a retrotransposon, causes early embryonic lethality

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Burst of young retrogenes and independent retrogene formation in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Cloning, characterization, and expression analysis of the novel acetyltransferase retrogene Ard1b in the mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Diet and the evolution of human amylase gene copy number variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The LTR enhancer of ERV-9 human endogenous retrovirus is active in oocytes and progenitor cells in transgenic zebrafish and humans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A family of human microRNA genes from miniature inverted-repeat transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Origin and evolution of human microRNAs from transposable elements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Exonization of the LTR transposable elements in human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Tracking the ancestry of a deeply conserved eumetazoan SINE domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Arc/Arg3.1 is essential for the consolidation of synaptic plasticity and memories.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The emergence of new genes on the young therian X.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The Role of Transposable Elements in the Origin and Evolution of MicroRNAs in Human

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transposable elements: an abundant and natural source of regulatory sequences for host genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Long non-coding RNAs as a source of new peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Ancient exaptation of a CORE-SINE retroposon into a highly conserved mammalian neuronal enhancer of the proopiomelanocortin gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

HERV-H RNA is abundant in human embryonic stem cells and a precise marker for pluripotency.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The evolution of cichlid fish egg-spots is linked with a cis-regulatory change

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Possible involvement of SINEs in mammalian-specific brain formation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Human polymorphism at microRNAs and microRNA target sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

V(D)J recombination: mechanisms of initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Exonization of transposed elements: A challenge and opportunity for evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The human PNMA family: novel neuronal proteins implicated in paraneoplastic neurological disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Role of retrotransposon-derived imprinted gene, Rtl1, in the feto-maternal interface of mouse placenta

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Characteristics of transposable element exonization within human and mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Widespread establishment and regulatory impact of Alu exons in human genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

From "junk" to gene: curriculum vitae of a primate receptor isoform gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Molecular domestication of transposable elements: from detrimental parasites to useful host genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Functional microRNAs and target sites are created by lineage-specific transposition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The Landscape of long noncoding RNA classification

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Y chromosomes: born to be destroyed.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Widespread contribution of transposable elements to the innovation of gene regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Repeated horizontal transfers of four DNA transposons in invertebrates and bats

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A mammalian conserved element derived from SINE displays enhancer properties recapitulating Satb2 expression in early-born callosal projection neurons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Pervasive Horizontal Transfer of Rolling-Circle Transposons among Animals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Rolling-circle transposons catalyze genomic innovation in a mammalian lineage

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The role of transposable elements in the regulation of IFN-lambda1 gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Endogenous retroviral sequences are required for tissue-specific expression of a human salivary amylase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Isolation and characterisation of GTF2IRD2, a novel fusion gene and member of the TFII-I family of transcription factors, deleted in Williams-Beuren syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

CENP-B is not critical for meiotic chromosome segregation in male mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Alu sequences are processed 7SL RNA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Transcriptional regulatory functions of nuclear long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Colloquium paper: uniquely human evolution of sialic acid genetics and biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Determining and dating recent rodent speciation events by using L1 (LINE-1) retrotransposons

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The captured retroviral envelope syncytin-A and syncytin-B genes are conserved in the Spalacidae together with hemotrichorial placentation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Enhancer evolution across 20 mammalian species

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolutionary fate of retroposed gene copies in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Diversity of retrotransposable elements in compact pufferfish genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Governing sex determination in fish: regulatory putsches and ephemeral dictators.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Horizontal transposon transfer in eukarya: detection, bias, and perspectives

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Genomic organization of duplicated short wave-sensitive and long wave-sensitive opsin genes in the green swordtail, Xiphophorus helleri

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

The repetitive landscape of the chicken genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Origin and evolution of yolk proteins: expansion and functional diversification of large lipid transfer protein superfamily.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Emergence of primate genes by retrotransposon-mediated sequence transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Origin and evolution of a placental-specific microRNA family in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

A single nucleotide polymorphism in a miR-1302 binding site in CGA increases the risk of idiopathic male infertility.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Inferring the expression variability of human transposable element-derived exons by linear model analysis of deep RNA sequencing data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Null Mutations in the Filaggrin Gene (FLG) Determine Major Susceptibility to Early-Onset Atopic Dermatitis that Persists into Adulthood

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Computational characterization of multiple Gag-like human proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Mammalian microRNAs derived from genomic repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10577-015-9493-5

Melanoma loss-of-function mutants in Xiphophorus caused by Xmrk-oncogene deletion and gene disruption by a transposable element

21 January 2018

1 reference

12 December 2020

Loss of N-glycolylneuraminic acid in humans: Mechanisms, consequences, and implications for hominid evolution

1 reference

12 December 2020

The Bov-B lines found in Vipera ammodytes toxic PLA2 genes are widespread in snake genomes

1 reference

12 December 2020

A New Exon Derived from a Mammalian Apparent LTR Retrotransposon of the SUPT16H Gene

1 reference

12 December 2020

Structure and phylogenetic analysis of an endogenous retrovirus inserted into the human growth factor gene pleiotrophin

1 reference

12 December 2020

10.1007/S10577-015-9493-5

Identifiers

DOI

1 reference

4 September 2017

1 reference