(Q38828884)

6 September 2017

1 reference

title

Genetic sources of population epigenomic variation (English)

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6 September 2017

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

author name string

Aaron Taudt

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Frank Johannes

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

publication date

9 May 2016

1 reference

6 September 2017

published in

Nature Reviews Genetics

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

volume

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

page(s)

319-332

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27156976%20AND%20SRC:MED&resulttype=core&format=json

ChIP-seq: advantages and challenges of a maturing technology

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An integrative approach to understanding the combinatorial histone code at functional elements.

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Integrative analysis of chromatin states in Arabidopsis identified potential regulatory mechanisms for natural antisense transcript production

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The Functional Topography of the Arabidopsis Genome Is Organized in a Reduced Number of Linear Motifs of Chromatin States

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Chromatin state analysis of the barley epigenome reveals a higher-order structure defined by H3K27me1 and H3K27me3 abundance

31 March 2020

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Integrative analysis of haplotype-resolved epigenomes across human tissues.

31 March 2020

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Promoter or enhancer, what's the difference? Deconstruction of established distinctions and presentation of a unifying model.

31 March 2020

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DNase I sensitivity QTLs are a major determinant of human expression variation

31 March 2020

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Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcription

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Identification of genetic variants that affect histone modifications in human cells

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Population Variation and Genetic Control of Modular Chromatin Architecture in Humans

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Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions

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Histone modifications for human epigenome analysis

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Chromatin architecture reorganization during stem cell differentiation.

31 March 2020

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Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels

31 March 2020

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DNA-binding factors shape the mouse methylome at distal regulatory regions

31 March 2020

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Cancer epigenomics: DNA methylomes and histone-modification maps

31 March 2020

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Natural variation of histone modification and its impact on gene expression in the rat genome

31 March 2020

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WDR5 associates with histone H3 methylated at K4 and is essential for H3 K4 methylation and vertebrate development

31 March 2020

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Genetic landscape of open chromatin in yeast.

31 March 2020

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Regulation of the boundaries of accessible chromatin

31 March 2020

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Heritable individual-specific and allele-specific chromatin signatures in humans

31 March 2020

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Conservation and divergence of methylation patterning in plants and animals

31 March 2020

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Genome-wide evolutionary analysis of eukaryotic DNA methylation.

31 March 2020

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Establishing, maintaining and modifying DNA methylation patterns in plants and animals

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31 March 2020

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Transcriptional and epigenetic dynamics during specification of human embryonic stem cells

31 March 2020

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Linking DNA methylation and histone modification: patterns and paradigms

31 March 2020

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DNA methylation pathways and their crosstalk with histone methylation

31 March 2020

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31 March 2020

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Evaluation of the Infinium Methylation 450K technology

31 March 2020

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Contribution of genetic variation to transgenerational inheritance of DNA methylation

31 March 2020

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Epigenome-wide scans identify differentially methylated regions for age and age-related phenotypes in a healthy ageing population

31 March 2020

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Neonatal DNA methylation profile in human twins is specified by a complex interplay between intrauterine environmental and genetic factors, subject to tissue-specific influence

31 March 2020

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Heritability and genomics of gene expression in peripheral blood

31 March 2020

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Worldwide patterns of human epigenetic variation

31 March 2020

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Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain

31 March 2020

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Genetic control of individual differences in gene-specific methylation in human brain.

31 March 2020

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DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

31 March 2020

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Population-specificity of human DNA methylation

31 March 2020

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Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects

31 March 2020

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Genome-wide variation of cytosine modifications between European and African populations and the implications for complex traits

31 March 2020

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Passive and active DNA methylation and the interplay with genetic variation in gene regulation

31 March 2020

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Genome-wide associations between genetic and epigenetic variation influence mRNA expression and insulin secretion in human pancreatic islets

31 March 2020

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The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts

31 March 2020

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Linking the genetic architecture of cytosine modifications with human complex traits

31 March 2020

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High density methylation QTL analysis in human blood via next-generation sequencing of the methylated genomic DNA fraction

31 March 2020

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31 March 2020

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Analysis pipelines and packages for Infinium HumanMethylation450 BeadChip (450k) data

31 March 2020

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Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences

31 March 2020

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Allele-specific methylation is prevalent and is contributed by CpG-SNPs in the human genome

31 March 2020

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Competition between DNA methylation and transcription factors determines binding of NRF1.

31 March 2020

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Patterns of population epigenomic diversity.

31 March 2020

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DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation.

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Epigenetic and genetic influences on DNA methylation variation in maize populations

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31 March 2020

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Evolution of DNA methylation patterns in the Brassicaceae is driven by differences in genome organization

31 March 2020

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The maize methylome influences mRNA splice sites and reveals widespread paramutation-like switches guided by small RNA.

31 March 2020

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Epigenetic natural variation in Arabidopsis thaliana

31 March 2020

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Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids.

31 March 2020

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Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage

31 March 2020

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Epigenetic and epigenomic variation in Arabidopsis thaliana.

31 March 2020

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Epigenetic variation: origin and transgenerational inheritance

31 March 2020

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Hidden genetic nature of epigenetic natural variation in plants.

31 March 2020

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Molecular mechanisms of epigenetic variation in plants

31 March 2020

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Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression

31 March 2020

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The contributions of transposable elements to the structure, function, and evolution of plant genomes

31 March 2020

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Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

31 March 2020

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Genetic perturbation of the maize methylome

31 March 2020

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Natural CMT2 variation is associated with genome-wide methylation changes and temperature seasonality

31 March 2020

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Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

31 March 2020

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Body-methylated genes in Arabidopsis thaliana are functionally important and evolve slowly.

31 March 2020

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Gene body methylation is conserved between plant orthologs and is of evolutionary consequence

31 March 2020

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Evolutionary patterns of genic DNA methylation vary across land plants.

31 March 2020

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Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden

31 March 2020

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Epigenome dynamics: a quantitative genetics perspective.

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Spontaneous epigenetic variation in the Arabidopsis thaliana methylome.

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Transgenerational epigenetic instability is a source of novel methylation variants

31 March 2020

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Environmentally responsive genome-wide accumulation of de novo Arabidopsis thaliana mutations and epimutations

31 March 2020

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The rate and molecular spectrum of spontaneous mutations in Arabidopsis thaliana

31 March 2020

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Arabidopsis MSH1 mutation alters the epigenome and produces heritable changes in plant growth

31 March 2020

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Heritable epigenetic variation among maize inbreds

31 March 2020

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A hypomethylated population of Brassica rapa for forward and reverse epi-genetics.

31 March 2020

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Energy use efficiency is characterized by an epigenetic component that can be directed through artificial selection to increase yield

31 March 2020

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Experimental alteration of DNA methylation affects the phenotypic plasticity of ecologically relevant traits in Arabidopsis thaliana

31 March 2020

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Inheritance patterns and stability of DNA methylation variation in maize near-isogenic lines

31 March 2020

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Mapping the epigenetic basis of complex traits.

31 March 2020

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Stress-induced DNA methylation changes and their heritability in asexual dandelions.

31 March 2020

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Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

31 March 2020

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Assessing the impact of transgenerational epigenetic variation on complex traits

31 March 2020

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Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature

31 March 2020

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Epigenetic variation creates potential for evolution of plant phenotypic plasticity

31 March 2020

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Epigenetic inheritance and the missing heritability problem

31 March 2020

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Quantitative epigenetics through epigenomic perturbation of isogenic lines

31 March 2020

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A unified approach to the evolutionary consequences of genetic and nongenetic inheritance

31 March 2020

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Population-epigenetic models of selection.

31 March 2020

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How epigenetic mutations can affect genetic evolution: model and mechanism

31 March 2020

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Epigenetic inheritance, epimutation, and the response to selection

31 March 2020

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Genetic variation and the evolution of epigenetic regulation

31 March 2020

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Purifying selection, drift, and reversible mutation with arbitrarily high mutation rates

31 March 2020

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Epigenetic mutations can both help and hinder adaptive evolution.

31 March 2020

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A neutrality test for detecting selection on DNA methylation using single methylation polymorphism frequency spectrum

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2016.45

Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRG.2016.45

Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2016.45

Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRG.2016.45

pENCODE: a plant encyclopedia of DNA elements

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRG.2016.45

jMOSAiCS: joint analysis of multiple ChIP-seq datasets

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRG.2016.45

Comparative annotation of functional regions in the human genome using epigenomic data

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2016.45

Epigenetic differences arise during the lifetime of monozygotic twins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2016.45

Single-cell epigenomics: techniques and emerging applications

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRG.2016.45

Rate, spectrum, and evolutionary dynamics of spontaneous epimutations

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27156976