(Q38913885)

7 September 2017

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title

DNA methyltransferases and epigenetic regulation in bacteria (English)

1 reference

7 September 2017

Satish Adhikari

1

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7 September 2017

Patrick D Curtis

series ordinal

2

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7 September 2017

publication date

29 July 2016

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FEMS Microbiology Reviews

7 September 2017

published in

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7 September 2017

volume

40

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7 September 2017

issue

5

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7 September 2017

page(s)

575-591

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An invertible element of DNA controls phase variation of type 1 fimbriae of Escherichia coli

7 September 2017

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Limiting DNA replication to once and only once

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Quantitation of Dam methyltransferase in Escherichia coli

21 January 2018

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Methylation patterns in pap regulatory DNA control pyelonephritis-associated pili phase variation in E. coli.

21 January 2018

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Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome

21 January 2018

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DomainSieve: a protein domain-based screen that led to the identification of dam-associated genes with potential link to DNA maintenance

21 January 2018

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The diversity and evolution of cell cycle regulation in alpha-proteobacteria: a comparative genomic analysis

21 January 2018

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YhdJ, a nonessential CcrM-like DNA methyltransferase of Escherichia coli and Salmonella enterica.

21 January 2018

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The isolation and characterization of the Escherichia coli DNA adenine methylase (dam) gene

21 January 2018

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Conjugal transfer of the virulence plasmid of Salmonella enterica is regulated by the leucine-responsive regulatory protein and DNA adenine methylation.

21 January 2018

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Regulation of traJ transcription in the Salmonella virulence plasmid by strand-specific DNA adenine hemimethylation.

21 January 2018

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Regulation of finP transcription by DNA adenine methylation in the virulence plasmid of Salmonella enterica

21 January 2018

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Epigenetic gene regulation in the bacterial world

21 January 2018

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High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model-based analyses of transposon-insertion sequencing data

21 January 2018

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Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

21 January 2018

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Dam-dependent phase variation of Ag43 in Escherichia coli is altered in a seqA mutant

21 January 2018

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STM2209-STM2208 (opvAB): a phase variation locus of Salmonella enterica involved in control of O-antigen chain length

21 January 2018

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OxyR-dependent formation of DNA methylation patterns in OpvABOFF and OpvABON cell lineages of Salmonella enterica.

21 January 2018

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Epigenetic Control of Salmonella enterica O-Antigen Chain Length: A Tradeoff between Virulence and Bacteriophage Resistance.

21 January 2018

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Getting in the loop: regulation of development in Caulobacter crescentus.

21 January 2018

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Identification of essential alphaproteobacterial genes reveals operational variability in conserved developmental and cell cycle systems.

21 January 2018

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Mismatch-, MutS-, MutL-, and helicase II-dependent unwinding from the single-strand break of an incised heteroduplex

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Global analysis of cell cycle gene expression of the legume symbiont Sinorhizobium meliloti.

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA adenine methylation is required to replicate both Vibrio cholerae chromosomes once per cell cycle

21 January 2018

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Feedback control of a master bacterial cell-cycle regulator

21 January 2018

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Epigenetics in human disease and prospects for epigenetic therapy

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA binding of the cell cycle transcriptional regulator GcrA depends on N6-adenosine methylation in Caulobacter crescentus and other Alphaproteobacteria

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Direct detection of DNA methylation during single-molecule, real-time sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Antirepression function in Escherichia coli for the cAMP-cAMP receptor protein transcriptional activator

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

On the nature of the deoxyribonucleic acid methylases. Biological evidence for the multiple nature of the enzymes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Cellular Responses to Cisplatin‐Induced DNA Damage

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA adenine methylase mutants of Salmonella typhimurium show defects in protein secretion, cell invasion, and M cell cytotoxicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Dam methylation regulates the expression of SPI-5-encoded sopB gene in Salmonella enterica serovar Typhimurium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA methylation by CcrM activates the transcription of two genes required for the division of Caulobacter crescentus.

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The functions of DNA methylation by CcrM in Caulobacter crescentus: a global approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Analysis of the CtrA pathway in Magnetospirillum reveals an ancestral role in motility in alphaproteobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Insights from a decade of biophysical studies on MutL: Roles in strand discrimination and mismatch removal.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The bacterial cell cycle regulator GcrA is a σ70 cofactor that drives gene expression from a subset of methylated promoters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Analysis of nonmethylated GATC sites in the Escherichia coli chromosome and identification of sites that are differentially methylated in response to environmental stimuli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

An essential role for DNA adenine methylation in bacterial virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Uneven distribution of GATC motifs in the Escherichia coli chromosome, its plasmids and its phages

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Self-perpetuating epigenetic pili switches in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The Mechanism by which DNA Adenine Methylase and PapI Activate the Pap Epigenetic Switch

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Oscillating global regulators control the genetic circuit driving a bacterial cell cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DnaA coordinates replication initiation and cell cycle transcription in Caulobacter crescentus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Molecular mechanisms of DNA mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Genome Modification in Enterococcus faecalis OG1RF Assessed by Bisulfite Sequencing and Single-Molecule Real-Time Sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Degradation of FinP antisense RNA from F-like plasmids: the RNA-binding protein, FinO, protects FinP from ribonuclease E

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA adenine methylase is essential for viability and plays a role in the pathogenesis of Yersinia pseudotuberculosis and Vibrio cholerae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The CcrM DNA methyltransferase of Agrobacterium tumefaciens is essential, and its activity is cell cycle regulated

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Genomics of DNA cytosine methylation in Escherichia coli reveals its role in stationary phase transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Dimeric configuration of SeqA protein bound to a pair of hemi-methylated GATC sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DnaA binding locus datA promotes DnaA-ATP hydrolysis to enable cell cycle-coordinated replication initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Complementary specificity of restriction endonucleases of Diplococcus pneumoniae with respect to DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA mismatch correction in a defined system

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Genes directly controlled by CtrA, a master regulator of the Caulobacter cell cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The complete methylome of Helicobacter pylori UM032

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Mismatch repair in Gram-positive bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Mechanisms and functions of DNA mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Role of SeqA and Dam in Escherichia coli gene expression: a global/microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Dam methylation: coordinating cellular processes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Roles of DNA adenine methylation in regulating bacterial gene expression and virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

SeqA: a negative modulator of replication initiation in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The myriad roles of cyclic AMP in microbial pathogens: from signal to sword

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Conservation of Dcm-mediated cytosine DNA methylation in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA replication initiation: mechanisms and regulation in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The methylomes of six bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Computational and genetic reduction of a cell cycle to its simplest, primordial components

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Once in a lifetime: strategies for preventing re-replication in prokaryotic and eukaryotic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Regulation of pyelonephritis-associated pili phase-variation in Escherichia coli: binding of the PapI and the Lrp regulatory proteins is controlled by DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Genome-wide analysis of deoxyadenosine methyltransferase-mediated control of gene expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA methylation modulates Salmonella enterica serovar Typhimurium virulence in Caenorhabditis elegans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Versatility of global transcriptional regulators in alpha-Proteobacteria: from essential cell cycle control to ancillary functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Structure of the endonuclease domain of MutL: unlicensed to cut.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Biodiversity on the Rocks: Macrofauna Inhabiting Authigenic Carbonate at Costa Rica Methane Seeps

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Epigenetic modifications and human disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DNA methylation affects the cell cycle transcription of the CtrA global regulator in Caulobacter

21 January 2018

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The Escherichia coli chromosome contains specific, unmethylated dam and dcm sites

21 January 2018

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The difficult interpretation of transcriptome data: the case of the GATC regulatory network

21 January 2018

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Characterization of the GATC regulatory network in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Analysis of global gene expression and double-strand-break formation in DNA adenine methyltransferase- and mismatch repair-deficient Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The Gal(alpha 1-4)Gal-specific tip adhesin of Escherichia coli P-fimbriae is needed for pyelonephritis to occur in the normal urinary tract.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The Brucella abortus CcrM DNA methyltransferase is essential for viability, and its overexpression attenuates intracellular replication in murine macrophages

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Positive outcomes influence the rate and time to publication, but not the impact factor of publications of clinical trial results

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Global gene expression in Escherichia coli biofilms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The Caulobacter crescentus ctrA P1 promoter is essential for the coordination of cell cycle events that prevent the overinitiation of DNA replication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

An assessment of the role of DNA adenine methyltransferase on gene expression regulation in E coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Cell-cycle progression and the generation of asymmetry in Caulobacter crescentus

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

DistAMo: A Web-Based Tool to Characterize DNA-Motif Distribution on Bacterial Chromosomes.

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Asymmetry of Dam remethylation on the leading and lagging arms of plasmid replicative intermediates

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

A cell cycle-regulated bacterial DNA methyltransferase is essential for viability

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Coordinate cell cycle control of a Caulobacter DNA methyltransferase and the flagellar genetic hierarchy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Contribution of facilitated diffusion and processive catalysis to enzyme efficiency: implications for the EcoRI restriction-modification system

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The Escherichia coli dam DNA methyltransferase modifies DNA in a highly processive reaction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

SeqA limits DnaA activity in replication from oriC in Escherichia coli.

21 January 2018

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https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The Escherichia coli SeqA protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

ChIP on Chip: surprising results are often artifacts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Competitive interaction of the OxyR DNA-binding protein and the Dam methylase at the antigen 43 gene regulatory region in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

A whole genome approach to in vivo DNA-protein interactions in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Inviability of dam recA and dam recB cells of Escherichia coli is correlated with their inability to repair DNA double-strand breaks produced by mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

N6-methyl-adenine: an epigenetic signal for DNA-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Epigenetic phase variation of the pap operon in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The CcrM DNA methyltransferase is widespread in the alpha subdivision of proteobacteria, and its essential functions are conserved in Rhizobium meliloti and Caulobacter crescentus

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Caulobacter Lon protease has a critical role in cell-cycle control of DNA methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

The global regulatory architecture of transcription during the Caulobacter cell cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

A Caulobacter DNA methyltransferase that functions only in the predivisional cell

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

Fuse or die: how to survive the loss of Dam inVibrio cholerae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FFEMSRE%2FFUW023

21 January 2018

Identifiers

DOI

10.1093/FEMSRE/FUW023

1 reference

7 September 2017

1 reference