(Q38993103)

8 September 2017

Decoding the regulatory landscape of medulloblastoma using DNA methylation sequencing (English)

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8 September 2017

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43

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Hans-Jörg Warnatz

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Christof von Kalle

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Christof von Kalle

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Marie-Laure Yaspo

39

Marie-Laure Yaspo

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8 September 2017

Kortine Kleinheinz

15

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Serap Erkek

Serap Erkek

16

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Jens Bunt

Jens Bunt

13

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Volker Hovestadt

Volker Hovestadt

1

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Till Milde

Till Milde

24

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Rogier Versteeg

Rogier Versteeg

23

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Jan Koster

Jan Koster

22

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Stefan M. Pfister

Stefan M Pfister

44

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Roland Eils

Roland Eils

38

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Hans Lehrach

36

Hans Lehrach

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Guido Reifenberger

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Jörg Felsberg

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45

Peter Lichter

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29

Stefan Rutkowski

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Marcel Kool

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Paul A Northcott

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Andrey Korshunov

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2

David T W Jones

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Robert J Wechsler-Reya

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Robert J Wechsler-Reya

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Michael D Taylor

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Natalie Jäger

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Marc Sultan

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Marina Ryzhova

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Cynthia C Bartholomae

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Cynthia C Bartholomae

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Chris Lawerenz

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Jürgen Eils

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Olaf Witt

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Wolfram Scheurlen

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Marc Zapatka

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Simone Picelli

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Meryem Ralser

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35

Arndt Borkhardt

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Wei Wang

4

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Katharina Stachurski

8

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Sonja Brun

12

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Ursula D Weber

17

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Sabine Schmidt

26

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Stephan Wolf

27

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Torsten Pietsch

28

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Pablo Landgraf

40

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8 September 2017

language of work or name

English

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publication date

18 May 2014

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510

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537-541

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7506

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https://scigraph.springernature.com/pub.10.1038/nature13268

8 September 2017

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cites work

Interplay between the cancer genome and epigenome

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Molecular subgroups of medulloblastoma: the current consensus

21 January 2018

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Dissecting the genomic complexity underlying medulloblastoma

21 January 2018

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Medulloblastomics: the end of the beginning

21 January 2018

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Robust molecular subgrouping and copy-number profiling of medulloblastoma from small amounts of archival tumour material using high-density DNA methylation arrays

21 January 2018

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Global epigenomic reconfiguration during mammalian brain development

21 January 2018

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Epigenome scans and cancer genome sequencing converge on WNK2, a kinase-independent suppressor of cell growth

21 January 2018

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Canonical WNT Signaling Promotes Osteogenesis by Directly StimulatingRunx2Gene Expression

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

21 January 2018

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Increased methylation variation in epigenetic domains across cancer types

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment

21 January 2018

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Medulloblastoma can be initiated by deletion of Patched in lineage-restricted progenitors or stem cells

21 January 2018

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Integrative genomic analysis of medulloblastoma identifies a molecular subgroup that drives poor clinical outcome

21 January 2018

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Lin28: primal regulator of growth and metabolism in stem cells

21 January 2018

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LIN28B induces neuroblastoma and enhances MYCN levels via let-7 suppression.

21 January 2018

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Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains

21 January 2018

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Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Human DNA methylomes at base resolution show widespread epigenomic differences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Chromatin organization is a major influence on regional mutation rates in human cancer cells.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Replication timing-related and gene body-specific methylation of active human genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Large conserved domains of low DNA methylation maintained by Dnmt3a

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Epigenomic analysis of multilineage differentiation of human embryonic stem cells

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Hyperconserved CpG domains underlie Polycomb-binding sites

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

FoxG1 interacts with Bmi1 to regulate self-renewal and tumorigenicity of medulloblastoma stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

OTX2 directly activates cell cycle genes and inhibits differentiation in medulloblastoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

HD-MB03 is a novel Group 3 medulloblastoma model demonstrating sensitivity to histone deacetylase inhibitor treatment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Joint binding of OTX2 and MYC in promotor regions is associated with high gene expression in medulloblastoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

STAR: ultrafast universal RNA-seq aligner

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

miRBase: integrating microRNA annotation and deep-sequencing data

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Model-based analysis of ChIP-Seq (MACS)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Identification of active regulatory regions from DNA methylation data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

DNA-binding specificities of human transcription factors

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE13268

Transcription factor MEF2C influences neural stem/progenitor cell differentiation and maturation in vivo

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE13268

DNA-binding factors shape the mouse methylome at distal regulatory regions

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24847876

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NATURE13268

1 reference

8 September 2017

1 reference