(Q41946470)

14 October 2017

Large conserved domains of low DNA methylation maintained by Dnmt3a (English)

1 reference

14 October 2017

0 references

15

1 reference

14 October 2017

22

1 reference

14 October 2017

Xiaotian Zhang

7

0 references

Yun Huang

object named as

Yun Huang

4

0 references

Lukas Chavez

object named as

Lukas Chavez

8

0 references

Anjana Rao

20

object named as

Anjana Rao

1 reference

14 October 2017

Mira Jeong

1

1 reference

14 October 2017

Deqiang Sun

2

1 reference

14 October 2017

Min Luo

3

1 reference

14 October 2017

Grant A Challen

5

1 reference

14 October 2017

Benjamin Rodriguez

6

1 reference

14 October 2017

Hui Wang

9

1 reference

14 October 2017

Rebecca Hannah

10

1 reference

14 October 2017

Sang-Bae Kim

11

1 reference

14 October 2017

Liubin Yang

12

1 reference

14 October 2017

Myunggon Ko

13

1 reference

14 October 2017

Rui Chen

14

1 reference

14 October 2017

Ju-Seog Lee

16

1 reference

14 October 2017

Preethi Gunaratne

17

1 reference

14 October 2017

Lucy A Godley

18

1 reference

14 October 2017

Gretchen J Darlington

19

1 reference

14 October 2017

Wei Li

21

1 reference

14 October 2017

language of work or name

English

0 references

publication date

24 November 2013

1 reference

14 October 2017

1 reference

14 October 2017

46

1 reference

14 October 2017

1

1 reference

14 October 2017

17-23

1 reference

https://scigraph.springernature.com/pub.10.1038/ng.2836

14 October 2017

0 references

cites work

BSeQC: quality control of bisulfite sequencing experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

TETonic shift: biological roles of TET proteins in DNA demethylation and transcription

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Epigenomic analysis of multilineage differentiation of human embryonic stem cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Master transcription factors and mediator establish super-enhancers at key cell identity genes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Regional activation of the cancer genome by long-range epigenetic remodeling

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

The anti-CMS technique for genome-wide mapping of 5-hydroxymethylcytosine

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Flow cytometry analysis of murine hematopoietic stem cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Prognostic relevance of integrated genetic profiling in acute myeloid leukemia

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Genomic distribution and inter-sample variation of non-CpG methylation across human cell types

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Dnmt3a is essential for hematopoietic stem cell differentiation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

5-Hy-droxy-3-methyl-5-phenyl-4,5-di-hydro-1H-pyrazole-1-carbothio-amide

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

The Drosophila gene disruption project: progress using transposons with distinctive site specificities

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Exome sequencing identifies somatic mutations of DNA methyltransferase gene DNMT3A in acute monocytic leukemia

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

DNMT3A Mutations in Acute Myeloid Leukemia

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Combinatorial transcriptional control in blood stem/progenitor cells: genome-wide analysis of ten major transcriptional regulators.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Human DNA methylomes at base resolution show widespread epigenomic differences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

BSMAP: whole genome bisulfite sequence MAPping program

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

SOAP2: an improved ultrafast tool for short read alignment

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Mutation in TET2 in myeloid cancers

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Analysis of gene expression data using BRB-ArrayTools.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Genetic characterization of TET1, TET2, and TET3 alterations in myeloid malignancies

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Model-based analysis of ChIP-Seq (MACS)

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

A rapid micro chromatin immunoprecipitation assay (microChIP).

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Promoter elements associated with RNA Pol II stalling in the Drosophila embryo

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Thousands of human mobile element fragments undergo strong purifying selection near developmental genes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

The epigenomics of cancer

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Cluster analysis and display of genome-wide expression patterns

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Isolation and functional properties of murine hematopoietic stem cells that are replicating in vivo

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

CpG islands in vertebrate genomes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Landmark analysis of DNMT3A mutations in hematological malignancies

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

DNA-binding factors shape the mouse methylome at distal regulatory regions

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Transcriptional features of genomic regulatory blocks

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3920905

Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates

18 August 2018

1 reference

Inducing nonsense suppression by targeted pseudouridylation

21 January 2018

1 reference

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

21 January 2018

1 reference

Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'

21 January 2018

1 reference

A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24270360

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NG.2836

1 reference

Dimensions Publication ID

14 October 2017

0 references

1 reference

14 October 2017

PubMed publication ID

24270360

1 reference