(Q47372352)

1 July 2018

title

Distinct Trends of DNA Methylation Patterning in the Innate and Adaptive Immune Systems (English)

1 reference

1 July 2018

0 references

12

1 reference

15 January 2018

http://europepmc.org/abstract/MED/27851971

Laura Clarke

13

1 reference

15 January 2018

http://europepmc.org/abstract/MED/27851971

Paul Flicek

16

1 reference

15 January 2018

http://europepmc.org/abstract/MED/27851971

Avik Datta

Avik Datta

14

0 references

Angelika Merkel

Angelika Merkel

2

0 references

Simon Heath

Simon Heath

21

0 references

Taco W Kuijpers

8

Taco W Kuijpers

1 reference

1 July 2018

Hendrik Gerard Stunnenberg

18

Hendrik G Stunnenberg

1 reference

1 July 2018

José I Martín-Subero

José I Martín-Subero

19

0 references

Ivo Glynne Gut

Ivo Gut

20

0 references

author name string

Ronald P Schuyler

1

1 reference

1 July 2018

Emanuele Raineri

3

1 reference

1 July 2018

Lucia Altucci

4

1 reference

1 July 2018

Edo Vellenga

5

1 reference

1 July 2018

Joost H A Martens

6

1 reference

1 July 2018

Farzin Pourfarzad

7

1 reference

1 July 2018

Frances Burden

9

1 reference

1 July 2018

Samantha Farrow

10

1 reference

1 July 2018

Kate Downes

11

1 reference

1 July 2018

Ernesto Lowy

15

1 reference

1 July 2018

Mattia Frontini

17

1 reference

1 July 2018

publication date

1 November 2016

1 reference

1 July 2018

published in

Cell Reports

1 reference

1 July 2018

volume

17

1 reference

1 July 2018

issue

8

1 reference

1 July 2018

page(s)

2101-2111

1 reference

1 July 2018

Insulator dysfunction and oncogene activation in IDH mutant gliomas

cites work

1 reference

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Hypothetical protein Rv3423.1 of Mycobacterium tuberculosis is a histone acetyltransferase

3 July 2018

1 reference

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Bacterial infection remodels the DNA methylation landscape of human dendritic cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation pathways and their crosstalk with histone methylation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Non-CG Methylation in the Human Genome.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Whole-genome fingerprint of the DNA methylome during human B cell differentiation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Human body epigenome maps reveal noncanonical DNA methylation variation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Regulation of DNA methylation dictates Cd4 expression during the development of helper and cytotoxic T cell lineages

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The interaction of mycobacterial protein Rv2966c with host chromatin is mediated through non-CpG methylation and histone H3/H4 binding

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Structural insight into autoinhibition and histone H3-induced activation of DNMT3A

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Genetic and epigenetic fine mapping of causal autoimmune disease variants

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Dissecting the dynamic changes of 5-hydroxymethylcytosine in T-cell development and differentiation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The mechanistic role of DNA methylation in myeloid leukemogenesis

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

CTCF: an architectural protein bridging genome topology and function

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Genome regulation at the peripheral zone: lamina associated domains in development and disease.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

T cell immunity as a tool for studying epigenetic regulation of cellular differentiation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Senescent cells harbour features of the cancer epigenome.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Large-scale hypomethylated blocks associated with Epstein-Barr virus-induced B-cell immortalization

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Nucleosome sliding mechanisms: new twists in a looped history.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Inferring nucleosome positions with their histone mark annotation from ChIP data

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Characterization of constitutive CTCF/cohesin loci: a possible role in establishing topological domains in mammalian genomes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Global epigenomic reconfiguration during mammalian brain development

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation regulated nucleosome dynamics

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation determines nucleosome occupancy in the 5'-CpG islands of tumor suppressor genes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Induced DNA demethylation can reshape chromatin topology at the IGF2-H19 locus.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Interplay between the cancer genome and epigenome

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation: roles in mammalian development

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Dynamic DNA methylation across diverse human cell lines and tissues

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Higher order chromatin organization in cancer

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Aberrant DNA methylation profiles in the premature aging disorders Hutchinson-Gilford Progeria and Werner syndrome

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Accumulation and loss of asymmetric non-CpG methylation during male germ-cell development

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Linking DNA methyltransferases to epigenetic marks and nucleosome structure genome-wide in human tumor cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Controls of nucleosome positioning in the human genome.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The GEM mapper: fast, accurate and versatile alignment by filtration

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Widespread plasticity in CTCF occupancy linked to DNA methylation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The role of mutations in epigenetic regulators in myeloid malignancies

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Comprehensive identification and annotation of cell type-specific and ubiquitous CTCF-binding sites in the human genome

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Impact of methylation on the physical properties of DNA.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Epigenetics and the adaptive immune response

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation does not stably lock gene expression but instead serves as a molecular mark for gene silencing memory

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Genomic distribution and inter-sample variation of non-CpG methylation across human cell types

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Function and disruption of DNA methyltransferase 3a cooperative DNA binding and nucleoprotein filament formation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Epigenetics of haematopoietic cell development

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Nucleosomes protect DNA from DNA methylation in vivo and in vitro.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Determinants of nucleosome organization in primary human cells

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Nucleosomes containing methylated DNA stabilize DNA methyltransferases 3A/3B and ensure faithful epigenetic inheritance

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Structure and function of mammalian DNA methyltransferases.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Comprehensive methylome map of lineage commitment from haematopoietic progenitors

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Relationship between nucleosome positioning and DNA methylation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Human DNA methylomes at base resolution show widespread epigenomic differences

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The ageing epigenome: damaged beyond repair?

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The insulator binding protein CTCF positions 20 nucleosomes around its binding sites across the human genome

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation dynamics during in vivo differentiation of blood and skin stem cells

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5889099

The Dnmt3L ADD Domain Controls Cytosine Methylation Establishment during Spermatogenesis

14 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27851971

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mouse Dnmt3a preferentially methylates linker DNA and is inhibited by histone H1

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27851971

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELREP.2016.10.054

1 reference

1 July 2018

PMC publication ID

5889099

1 reference

1 July 2018

1 reference

1 July 2018