(Q57255613)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

title

Toward genome-enabled mycology (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

0 references

Joseph W Spatafora

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

publication date

8 August 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

volume

105

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

page(s)

1339-1349

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

Coral-associated marine fungi form novel lineages and heterogeneous assemblages

7 March 2020

cites work

1 reference

Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens

21 January 2018

1 reference

Phylogenetic and phylogenomic overview of the Polyporales

21 January 2018

1 reference

Prepublication data sharing

21 January 2018

1 reference

The Fungi: 1, 2, 3 ... 5.1 million species?

21 January 2018

1 reference

Research Coordination Networks: a phylogeny for kingdom Fungi (Deep Hypha).

21 January 2018

1 reference

Horizontal transfer and death of a fungal secondary metabolic gene cluster

21 January 2018

1 reference

Distribution and bioinformatic analysis of the cerato-platanin protein family in Dikarya.

21 January 2018

1 reference

Saccharomyces Genome Database: the genomics resource of budding yeast

21 January 2018

1 reference

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

21 January 2018

1 reference

CFGP 2.0: a versatile web-based platform for supporting comparative and evolutionary genomics of fungi and Oomycetes

21 January 2018

1 reference

Population genomics of drug resistance in Candida albicans.

21 January 2018

1 reference

Metatranscriptomics reveals the diversity of genes expressed by eukaryotes in forest soils

21 January 2018

1 reference

A novel fungal family of oligopeptide transporters identified by functional metatranscriptomics of soil eukaryotes

21 January 2018

1 reference

Phylogenetic analysis of gene expression

21 January 2018

1 reference

A hybrid micro-macroevolutionary approach to gene tree reconstruction.

21 January 2018

1 reference

The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

21 January 2018

1 reference

A consistent phylogenetic backbone for the fungi

21 January 2018

1 reference

Companies 'going long' generate sequencing buzz at Marco Island

21 January 2018

1 reference

Population genomics and local adaptation in wild isolates of a model microbial eukaryote

21 January 2018

1 reference

Phylogenies from molecular sequences: inference and reliability

21 January 2018

1 reference

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

21 January 2018

1 reference

A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

21 January 2018

1 reference

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

21 January 2018

1 reference

The genome sequence of the filamentous fungus Neurospora crassa

21 January 2018

1 reference

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

21 January 2018

1 reference

21 January 2018

1 reference

Maximum likelihood models and algorithms for gene tree evolution with duplications and losses.

21 January 2018

1 reference

The genome portal of the Department of Energy Joint Genome Institute

21 January 2018

1 reference

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

21 January 2018

1 reference

Global species numbers of fungi: are tropical studies and molecular approaches contributing to a more robust estimate?

21 January 2018

1 reference

After the gold rush, or before the flood? Evolutionary morphology of mushroom-forming fungi (Agaricomycetes) in the early 21st century

21 January 2018

1 reference

Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences

21 January 2018

1 reference

YeastBook: an encyclopedia of the reference eukaryotic cell

21 January 2018

1 reference

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

21 January 2018

1 reference

Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay.

21 January 2018

1 reference

The molecular revolution in ectomycorrhizal ecology: peeking into the black-box.

21 January 2018

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Polyporales genomes reveal the genetic architecture underlying tetrapolar and bipolar mating systems.

21 January 2018

1 reference

The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism

21 January 2018

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Diversity and evolution of ABC proteins in basidiomycetes.

21 January 2018

1 reference

A high-density single nucleotide polymorphism map for Neurospora crassa

21 January 2018

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Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model

21 January 2018

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Fungal diversity in deep-sea hydrothermal ecosystems

21 January 2018

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Evolution of the sex-related locus and genomic features shared in microsporidia and fungi

21 January 2018

1 reference

Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life

21 January 2018

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Phylogenomic analyses support the monophyly of Taphrinomycotina, including Schizosaccharomyces fission yeasts

21 January 2018

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Phylogenomic analyses predict sistergroup relationship of nucleariids and fungi and paraphyly of zygomycetes with significant support

21 January 2018

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Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis

21 January 2018

1 reference

Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78

21 January 2018

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Genome-wide association studies for complex traits: consensus, uncertainty and challenges

21 January 2018

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Reconstructing the fungal tree of life using phylogenomics and a preliminary investigation of the distribution of yeast prion-like proteins in the fungal kingdom.

21 January 2018

1 reference

Comparative genomics and evolutionary analysis of hydrophobins from three species of wood-degrading fungi

21 January 2018

1 reference

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

21 January 2018

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Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

21 January 2018

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Landscape of next-generation sequencing technologies.

21 January 2018

1 reference

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

21 January 2018

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Genome sequence of the model mushroom Schizophyllum commune

21 January 2018

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A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales).

21 January 2018

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The genome of the xerotolerant mold Wallemia sebi reveals adaptations to osmotic stress and suggests cryptic sexual reproduction

21 January 2018

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Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

21 January 2018

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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs

21 January 2018

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Resolving difficult phylogenetic questions: why more sequences are not enough

21 January 2018

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Phylogenetic inference using whole genomes

21 January 2018

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Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms.

21 January 2018

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Gene transfer into the fungi

21 January 2018

1 reference

A phylogenomic analysis of the Ascomycota

21 January 2018

1 reference

Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on 10 sequenced genomes

21 January 2018

1 reference

Inferring ancient divergences requires genes with strong phylogenetic signals.

21 January 2018

1 reference

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

21 January 2018

1 reference

Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities

21 January 2018

1 reference

Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi

21 January 2018

1 reference

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

21 January 2018

1 reference

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

21 January 2018

1 reference

FungiDB: an integrated functional genomics database for fungi

21 January 2018

1 reference

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

21 January 2018

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Single cell genomics: an individual look at microbes

21 January 2018

1 reference

Discovery of glycoside hydrolase enzymes in an avicel-adapted forest soil fungal community by a metatranscriptomic approach

21 January 2018

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Mushrooms: morphological complexity in the fungi

21 January 2018

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Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle

21 January 2018

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Reconciliation with non-binary species trees.

21 January 2018

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Functional and evolutionary analysis of the genome of an obligate fungal symbiont

21 January 2018

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Recent developments in the taxonomic affiliation and phylogenetic positioning of fungi: impact in applied microbiology and environmental biotechnology

21 January 2018

1 reference

The genome sequence of Schizosaccharomyces pombe

21 January 2018

1 reference

Genomewide annotation and comparative genomics of cytochrome P450 monooxygenases (P450s) in the polypore species Bjerkandera adusta, Ganoderma sp. and Phlebia brevispora.

21 January 2018

1 reference

A beginner's guide to eukaryotic genome annotation

21 January 2018

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Evolution of RNA interference proteins dicer and argonaute in Basidiomycota

21 January 2018

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Detecting and Overcoming Systematic Errors in Genome-Scale Phylogenies

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.3852/13-196

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23928422%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

1 reference