(Q34030523)

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In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes.

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scholarly article

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

In-depth characterization via complementing culture-independent approaches of the microbial community in an acidic hot spring of the Colombian Andes (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Luisa Delgado-Serrano

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Vanja Klepac-ceraj

5

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

7

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Maria Mercedes Zambrano

9

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Laura C Bohorquez

object named as

Laura C Bohorquez

1

0 references

object named as

Sandra Baena

8

0 references

author name string

Gina López

3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

César Osorio-Forero

4

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Roberto Kolter

6

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

publication date

27 September 2011

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Microbial Ecology

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

63

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

103-115

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Biodiversity hotspots for conservation priorities

1 reference

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High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment

1 reference

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Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation

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Urban aerosols harbor diverse and dynamic bacterial populations

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Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray.

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Environmental microarray analyses of Antarctic soil microbial communities

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Microbial population structures in the deep marine biosphere

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Microbial diversity in the deep sea and the underexplored "rare biosphere"

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Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine

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PCR-induced sequence artifacts and bias: insights from comparison of two 16S rRNA clone libraries constructed from the same sample.

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Evaluation of PCR-generated chimeras, mutations, and heteroduplexes with 16S rRNA gene-based cloning

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Comparing microarrays and next-generation sequencing technologies for microbial ecology research.

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21 January 2018

Spatial differences in bacterioplankton composition along the Catalan coast (NW Mediterranean) assessed by molecular fingerprinting.

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Vertical distribution of structure and function of the methanogenic archaeal community in Lake Dagow sediment.

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21 January 2018

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

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Infernal 1.0: inference of RNA alignments

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Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

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Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

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Bacterial diversity in aquatic and other environments: what 16S rDNA libraries can tell us.

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21 January 2018

Accuracy and quality of massively parallel DNA pyrosequencing

1 reference

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21 January 2018

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

1 reference

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21 January 2018

Relationship between cystic fibrosis respiratory tract bacterial communities and age, genotype, antibiotics and Pseudomonas aeruginosa.

1 reference

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21 January 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

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21 January 2018

ARB: a software environment for sequence data

1 reference

https://api.crossref.org/works/10.1007%2FS00248-011-9943-3

21 January 2018

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

1 reference

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21 January 2018

Bacterial community structure of acid-impacted lakes: what controls diversity?

1 reference

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21 January 2018

Microbial communities and geochemical dynamics in an extremely acidic, metal-rich stream at an abandoned sulfide mine (Huelva, Spain) underpinned by two functional primary production systems

1 reference

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21 January 2018

Characterization of a bacterial community in an abandoned semiarid lead-zinc mine tailing site

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21 January 2018

Zavarzinella formosa gen. nov., sp. nov., a novel stalked, Gemmata-like planctomycete from a Siberian peat bog.

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21 January 2018

Acidobacteria phylum sequences in uranium-contaminated subsurface sediments greatly expand the known diversity within the phylum

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21 January 2018

Novel nickel resistance genes from the rhizosphere metagenome of plants adapted to acid mine drainage

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21 January 2018

Ferroplasma acidiphilum gen. nov., sp. nov., an acidophilic, autotrophic, ferrous-iron-oxidizing, cell-wall-lacking, mesophilic member of the Ferroplasmaceae fam. nov., comprising a distinct lineage of the Archaea

1 reference

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21 January 2018

Picrophilus oshimae and Picrophilus torridus fam. nov., gen. nov., sp. nov., Two Species of Hyperacidophilic, Thermophilic, Heterotrophic, Aerobic Archaea

1 reference

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21 January 2018

Lineages of acidophilic archaea revealed by community genomic analysis

1 reference

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21 January 2018

Molecular analysis of microbial community structure in an arsenite-oxidizing acidic thermal spring

1 reference

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21 January 2018

Archaeal diversity in waters from deep South African gold mines

1 reference

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21 January 2018

Bacterial diversity and sulfur cycling in a mesophilic sulfide-rich spring

1 reference

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21 January 2018

Microbial ecology of an extreme acidic environment, the Tinto River.

1 reference

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21 January 2018

Bacterial community composition in thermophilic microbial mats from five hot springs in central Tibet.

1 reference

https://api.crossref.org/works/10.1007%2FS00248-011-9943-3

21 January 2018

Microbial diversity of a sulfide black smoker in main endeavour hydrothermal vent field, Juan de Fuca Ridge

1 reference

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A hydrogen-based subsurface microbial community dominated by methanogens.

1 reference

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21 January 2018

The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

1 reference

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21 January 2018

Despite strong seasonal responses, soil microbial consortia are more resilient to long-term changes in rainfall than overlying grassland.

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Exploring the diversity of bacterial communities in sediments of urban mangrove forests

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Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei

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Autotrophy of green non-sulphur bacteria in hot spring microbial mats: biological explanations for isotopically heavy organic carbon in the geological record.

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Production of glycolic acid by chemolithotrophic iron- and sulfur-oxidizing bacteria and its role in delineating and sustaining acidophilic sulfide mineral-oxidizing consortia

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21 January 2018

The 'rare biosphere': a reality check

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Ironing out the wrinkles in the rare biosphere through improved OTU clustering

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Effects of experimental choices and analysis noise on surveys of the "rare biosphere"

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Experimental factors affecting PCR-based estimates of microbial species richness and evenness.

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12 December 2020

based on heuristic

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Statistical analysis of the direct count method for enumerating bacteria

1 reference

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12 December 2020

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Phylogenetic identification and in situ detection of individual microbial cells without cultivation

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Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations

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based on heuristic

inferred from PubMed ID database lookup

Pyrosequencing enumerates and contrasts soil microbial diversity

1 reference

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based on heuristic

inferred from PubMed ID database lookup

Carbon, iron and sulfur metabolism in acidophilic micro-organisms

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00248-011-9943-3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

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1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21947461%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

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