(Q35262504)

7 August 2017

De novo transcriptome assembly for a non-model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease (English)

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7 August 2017

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Triatoma brasiliensis

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Emmanuelle Jacquin-Joly

object named as

E Jacquin-Joly

4

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author name string

A Marchant

1

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7 August 2017

F Mougel

2

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7 August 2017

C Almeida

3

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7 August 2017

J Costa

5

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7 August 2017

M Harry

6

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7 August 2017

language of work or name

English

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publication date

19 September 2014

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7 August 2017

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7 August 2017

143

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7 August 2017

2

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7 August 2017

225-239

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https://scigraph.springernature.com/pub.10.1007/s10709-014-9790-5

7 August 2017

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cites work

Transcriptomics of the bed bug (Cimex lectularius).

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Dynamics between sylvatic, peridomestic and domestic populations of Triatoma brasiliensis (Hemiptera: Reduviidae) in Ceara State, Northeastern Brazil.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Reference-free transcriptome assembly in non-model animals from next-generation sequencing data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Ecotopes, natural infection and trophic resources of Triatoma brasiliensis (Hemiptera, Reduviidae, Triatominae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

The epidemiologic importance of Triatoma brasiliensis as a chagas disease vector in Brazil: a revision of domiciliary captures during 1993-1999.

21 January 2018

2 references

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

21 January 2018

12 December 2020

De novo characterization of the gene-rich transcriptomes of two color-polymorphic spiders, Theridion grallator and T. californicum (Araneae: Theridiidae), with special reference to pigment genes

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

The variant call format and VCFtools

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Applications of next generation sequencing in molecular ecology of non-model organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Candidate chemosensory genes in the Stemborer Sesamia nonagrioides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Full-length transcriptome assembly from RNA-Seq data without a reference genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Elimination of Rhodnius prolixus in Central America

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Optimization of de novo transcriptome assembly from high-throughput short read sequencing data improves functional annotation for non-model organisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

CAP3: A DNA sequence assembly program

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Sequencing and de novo assembly of the western tarnished plant bug (Lygus hesperus) transcriptome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Pyrosequencing the transcriptome of the greenhouse whitefly, Trialeurodes vaporariorum reveals multiple transcripts encoding insecticide targets and detoxifying enzymes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

The Sequence Alignment/Map format and SAMtools

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Deep sequencing of the transcriptomes of soybean aphid and associated endosymbionts

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Cutadapt removes adapter sequences from high-throughput sequencing reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Next-generation transcriptome assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Evaluating characteristics of de novo assembly software on 454 transcriptome data: a simulation approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

De novo assembly of short sequence reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

A comparison of the olfactory gene repertoires of adults and larvae in the noctuid moth Spodoptera littoralis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

BEDTools: a flexible suite of utilities for comparing genomic features

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Evaluating de Bruijn graph assemblers on 454 transcriptomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

De novo assembly and analysis of RNA-seq data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Complete alternative splicing events are bubbles in splicing graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

The sialotranscriptome of the blood-sucking bug Triatoma brasiliensis (Hemiptera, Triatominae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Quality control and preprocessing of metagenomic datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Fast identification and removal of sequence contamination from genomic and metagenomic datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Adaptation genomics: the next generation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Optimization of de novo transcriptome assembly from next-generation sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Challenges and strategies in transcriptome assembly and differential gene expression quantification. A comprehensive in silico assessment of RNA-seq experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Next generation sequencing in functional genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS10709-014-9790-5

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.

21 January 2018

1 reference

12 December 2020

The impact of Chagas disease control in Latin America: a review

1 reference

12 December 2020

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

1 reference

12 December 2020

The synanthropic process of Chagas disease vectors in Brazil, with special attention to Triatoma brasiliensis Neiva, 1911 (Hemiptera, reduviidae, triatominae) population, genetical, ecological, and epidemiological aspects.

1 reference

12 December 2020

Trans-splicing of pre-mRNA in plants, animals, and protists

1 reference

12 December 2020

Inferring from the Cyt B gene the Triatoma brasiliensis Neiva, 1911 (Hemiptera: Reduviidae: Triatominae) genetic structure and domiciliary infestation in the state of Paraíba, Brazil.

1 reference

12 December 2020

Single read and paired end mRNA-Seq Illumina libraries from 10 nanograms total RNA.

1 reference

12 December 2020

10.1007/S10709-014-9790-5

Identifiers

DOI

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7 August 2017

1 reference