(Q37260196)

19 August 2017

Folding simulations of a three-stranded antiparallel beta -sheet peptide (English)

1 reference

19 August 2017

Ferrara P

1

1 reference

19 August 2017

Caflisch A

series ordinal

2

1 reference

19 August 2017

language of work or name

English

0 references

publication date

1 September 2000

1 reference

Proceedings of the National Academy of Sciences of the United States of America

19 August 2017

1 reference

19 August 2017

97

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19 August 2017

20

1 reference

19 August 2017

10780-10785

1 reference

Mapping the transition state of the WW domain beta-sheet.

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Uniquely folded mini-protein motifs.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

The design of linear peptides that fold as monomeric beta-sheet structures.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Understanding beta-hairpin formation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Molecular dynamics simulations of unfolding and refolding of a beta-hairpin fragment of protein G

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Effective energy function for proteins in solution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

De novo design of a monomeric three-stranded antiparallel beta-sheet

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

The fundamentals of protein folding: bringing together theory and experiment

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Solution conformations and thermodynamics of structured peptides: molecular dynamics simulation with an implicit solvation model.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Folding dynamics and mechanism of beta-hairpin formation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Molecular dynamics simulation of protein denaturation: solvation of the hydrophobic cores and secondary structure of barnase

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

A revised set of potentials for beta-turn formation in proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Solvation energy in protein folding and binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

"New view" of protein folding reconciled with the old through multiple unfolding simulations.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=27100

Reversible peptide folding in solution by molecular dynamics simulation

26 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

Turn Residue Sequence Determines β-Hairpin Conformation in Designed Peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

Acid and thermal denaturation of barnase investigated by molecular dynamics simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

Computer simulations of protein folding by targeted molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.190324897

21 January 2018

Identifiers

DOI

10.1073/PNAS.190324897

1 reference

19 August 2017

0 references

1 reference

19 August 2017

PubMed publication ID

10984515

1 reference