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Lessons from non-canonical splicing
scientific article published on 31 May 2016
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scholarly article
1 reference
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Europe PubMed Central
PMC publication ID
5154377
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
review article
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Europe PubMed Central
title
Lessons from non-canonical splicing
(English)
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Europe PubMed Central
PMC publication ID
5154377
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
author
Jernej Ule
series ordinal
3
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Europe PubMed Central
PMC publication ID
5154377
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
Christopher R Sibley
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1
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Europe PubMed Central
PMC publication ID
5154377
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
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3 April 2020
Lorea Blazquez
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2
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PMC publication ID
5154377
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3 April 2020
author name string
Lorea Blazquez
series ordinal
2
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PMC publication ID
5154377
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20 August 2017
publication date
31 May 2016
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Europe PubMed Central
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5154377
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retrieved
3 April 2020
number of pages
15
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inferred from page(s)
published in
Nature Reviews Genetics
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Europe PubMed Central
PMC publication ID
5154377
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retrieved
3 April 2020
volume
17
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Europe PubMed Central
PMC publication ID
5154377
reference URL
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3 April 2020
issue
7
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5154377
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3 April 2020
page(s)
407-421
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Europe PubMed Central
PMC publication ID
5154377
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
exact match
https://scigraph.springernature.com/pub.10.1038/nrg.2016.46
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Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Protein-RNA interactions: new genomic technologies and perspectives
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Repetitive elements may comprise over two-thirds of the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Transcriptome-wide discovery of circular RNAs in Archaea
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Peripheral SMN restoration is essential for long-term rescue of a severe spinal muscular atrophy mouse model
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Frequent pathway mutations of splicing machinery in myelodysplasia
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Association of TALS developmental disorder with defect in minor splicing component U4atac snRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Mutations in U4atac snRNA, a component of the minor spliceosome, in the developmental disorder MOPD I
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Cryptic splice sites and split genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Widespread establishment and regulatory impact of Alu exons in human genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
A global analysis of C. elegans trans-splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Noisy splicing drives mRNA isoform diversity in human cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Microexon-based regulation of ITSN1 and Src SH3 domains specificity relies on introduction of charged amino acids into the interaction interface
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Global analysis of trans-splicing in Drosophila.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Alternative splicing and evolution: diversification, exon definition and function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
The intronic splicing code: multiple factors involved in ATM pseudoexon definition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
The pivotal roles of TIA proteins in 5' splice-site selection of alu exons and across evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Enhanced exon-skipping induced by U7 snRNA carrying a splicing silencer sequence: Promising tool for DMD therapy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
SLC45A3-ELK4 is a novel and frequent erythroblast transformation-specific fusion transcript in prostate cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
TopHat: discovering splice junctions with RNA-Seq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Recognition of atypical 5' splice sites by shifted base-pairing to U1 snRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Transcriptome sequencing to detect gene fusions in cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Exon creation and establishment in human genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Transposable elements and the evolution of regulatory networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Intrasplicing coordinates alternative first exons with alternative splicing in the protein 4.1R gene.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
U7 snRNA-mediated correction of aberrant splicing caused by activation of cryptic splice sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Regulation of retention of FosB intron 4 by PTB
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Sequence features responsible for intron retention in human
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
U12DB: a database of orthologous U12-type spliceosomal introns
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Comprehensive splice-site analysis using comparative genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Intronic binding sites for hnRNP A/B and hnRNP F/H proteins stimulate pre-mRNA splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Transcription-mediated gene fusion in the human genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Subdivision of large introns in Drosophila by recursive splicing at nonexonic elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Are splicing mutations the most frequent cause of hereditary disease?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Rescue of dystrophic muscle through U7 snRNA-mediated exon skipping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Trans-splicing of the mod(mdg4) complex locus is conserved between the distantly related species Drosophila melanogaster and D. virilis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
WebLogo: A Sequence Logo Generator
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Hot L1s account for the bulk of retrotransposition in the human population
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
FosB is highly expressed in normal mammary epithelia, but down-regulated in poorly differentiated breast carcinomas
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Selecting for functional alternative splices in ESTs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Complementary signaling pathways regulate the unfolded protein response and are required for C. elegans development
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
XBP1 mRNA is induced by ATF6 and spliced by IRE1 in response to ER stress to produce a highly active transcription factor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Transgene analysis proves mRNA trans-splicing at the complex mod(mdg4) locus in Drosophila.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Regulation of alternative splicing by RNA editing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
A novel Alu-like element rearranged in the dystrophin gene causes a splicing mutation in a family with X-linked dilated cardiomyopathy.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Terminal intron dinucleotide sequences do not distinguish between U2- and U12-dependent introns
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Stable alteration of pre-mRNA splicing patterns by modified U7 small nuclear RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Restoration of correct splicing in thalassemic pre-mRNA by antisense oligonucleotides
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Exon definition may facilitate splice site selection in RNAs with multiple exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Scrambled exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Selection of splice sites in pre-mRNAs with short internal exons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Origin of the Alu family: a family of Alu-like monomers gave birth to the left and the right arms of the Alu elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
Evolution and tinkering
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
23 August 2017
RNA mis-splicing in disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Pervasive transcription read-through promotes aberrant expression of oncogenes and RNA chimeras in renal carcinoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
An overview of the clinical application of antisense oligonucleotides for RNA-targeting therapies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Alternative Splicing in the Mammalian Nervous System: Recent Insights into Mechanisms and Functional Roles
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Regulation of alternative splicing through coupling with transcription and chromatin structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Compromised autophagy and neurodegenerative diseases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
MYC regulates the core pre-mRNA splicing machinery as an essential step in lymphomagenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Regulated Intron Retention and Nuclear Pre-mRNA Decay Contribute to PABPN1 Autoregulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
The RNA binding protein quaking regulates formation of circRNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
A highly conserved program of neuronal microexons is misregulated in autistic brains
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Competition between target sites of regulators shapes post-transcriptional gene regulation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
A comprehensive survey of non-canonical splice sites in the human transcriptome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Regulation of gene expression through production of unstable mRNA isoforms.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Considerations for a Successful RNA Trans-splicing Repair of Genetic Disorders
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
A day in the life of the spliceosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Role of pseudoexons and pseudointrons in human cancer.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
In vitro correction of a pseudoexon-generating deep intronic mutation in LGMD2A by antisense oligonucleotides and modified small nuclear RNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Global regulation of alternative splicing by adenosine deaminase acting on RNA (ADAR).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
The spliceosome as a target of novel antitumour drugs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Exon and intron definition in pre-mRNA splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Pre-mRNA splicing in disease and therapeutics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
6 September 2017
Inverse splicing of a discontinuous pre-mRNA intron generates a circular exon in a HeLa cell nuclear extract
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
14 September 2017
In vitro generation of a circular exon from a linear pre-mRNA transcript
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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14 September 2017
Cancer-Associated SF3B1 Hotspot Mutations Induce Cryptic 3' Splice Site Selection through Use of a Different Branch Point
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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14 September 2017
Intron retention is a widespread mechanism of tumor-suppressor inactivation.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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14 September 2017
Disease-causing mutations improving the branch site and polypyrimidine tract: pseudoexon activation of LINE-2 and antisense Alu lacking the poly(T)-tail.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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14 September 2017
RNA structure is a key regulatory element in pathological ATM and CFTR pseudoexon inclusion events
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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14 September 2017
Intronic alterations in BRCA1 and BRCA2: effect on mRNA splicing fidelity and expression
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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14 September 2017
Widespread intron retention diversifies most cancer transcriptomes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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28 September 2017
Computational discovery of internal micro-exons
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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28 September 2017
A new type of mutation causes a splicing defect in ATM.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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28 September 2017
Messenger RNA repair and restoration of protein function by spliceosome-mediated RNA trans-splicing
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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28 September 2017
Does steric interference between splice sites block the splicing of a short c-src neuron-specific exon in non-neuronal cells?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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28 September 2017
Splicing of many human genes involves sites embedded within introns
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
RBFOX and PTBP1 proteins regulate the alternative splicing of micro-exons in human brain transcripts
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
Making ends meet: a role of RNA ligase RTCB in unfolded protein response
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
U2AF1 mutations alter splice site recognition in hematological malignancies
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26 June 2018
Widespread recognition of 5' splice sites by noncanonical base-pairing to U1 snRNA involving bulged nucleotides
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
Total RNA sequencing reveals nascent transcription and widespread co-transcriptional splicing in the human brain
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
The effect of intron length on exon creation ratios during the evolution of mammalian genomes
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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26 June 2018
Exon circularization in mammalian nuclear extracts.
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PubMed Central
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26 June 2018
The biogenesis and emerging roles of circular RNAs.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Regulation of constitutive and alternative mRNA splicing across the human transcriptome by PRPF8 is determined by 5' splice site strength
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
circRNA biogenesis competes with pre-mRNA splicing.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Orchestrated intron retention regulates normal granulocyte differentiation.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Co-transcriptional degradation of aberrant pre-mRNA by Xrn2.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Auto- and cross-regulation of the hnRNP L proteins by alternative splicing.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Intron retention is a major phenomenon in alternative splicing in Arabidopsis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Alternative splicing in disease and therapy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Detection and evaluation of intron retention events in the human transcriptome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Phenotype correction of hemophilia A mice by spliceosome-mediated RNA trans-splicing
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Generation of alternative Ultrabithorax isoforms and stepwise removal of a large intron by resplicing at exon-exon junctions.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
retrieved
2 September 2018
Splicing of a divergent subclass of AT-AC introns requires the major spliceosomal snRNAs.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
Synonymous Mutations Frequently Act as Driver Mutations in Human Cancers
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5154377
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2 September 2018
High-throughput gene targeting and phenotyping in zebrafish using CRISPR/Cas9.
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21 January 2018
Mitochondrial transport in neurons: impact on synaptic homeostasis and neurodegeneration
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Crossref
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https://api.crossref.org/works/10.1038%2FNRG.2016.46
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21 January 2018
Evidence for trans splicing in trypanosomes
1 reference
stated in
Crossref
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https://api.crossref.org/works/10.1038%2FNRG.2016.46
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31 March 2020
A Novel Mutation in the Cystic Fibrosis Gene in Patients with Pulmonary Disease but Normal Sweat Chloride Concentrations
1 reference
stated in
Crossref
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https://api.crossref.org/works/10.1038%2FNRG.2016.46
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31 March 2020
Multiple cryptic splice sites can be activated by IDS point mutations generating misspliced transcripts
1 reference
stated in
Crossref
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https://api.crossref.org/works/10.1038%2FNRG.2016.46
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31 March 2020
Pre-spliceosomal binding of U1 small nuclear ribonucleoprotein (RNP) and heterogenous nuclear RNP E1 is associated with suppression of a growth hormone receptor pseudoexon
1 reference
stated in
Crossref
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https://api.crossref.org/works/10.1038%2FNRG.2016.46
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31 March 2020
Transposable elements in disease-associated cryptic exons
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Crossref
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https://api.crossref.org/works/10.1038%2FNRG.2016.46
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31 March 2020
Identifiers
DOI
10.1038/NRG.2016.46
1 reference
stated in
Europe PubMed Central
PMC publication ID
5154377
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
PMC publication ID
5154377
1 reference
stated in
Europe PubMed Central
PMC publication ID
5154377
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
PubMed publication ID
27240813
1 reference
stated in
Europe PubMed Central
PMC publication ID
5154377
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27240813%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 April 2020
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