(Q38624954)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28808230%20AND%20SRC:MED&resulttype=core&format=json

27 March 2020

title

Environmental drivers of a microbial genomic transition zone in the ocean's interior (English)

1 reference

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27 March 2020

1

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27 March 2020

Frank O Aylward

3

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27 March 2020

Edward F. DeLong

7

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27 March 2020

6

David M Karl

1 reference

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27 March 2020

4

John M Eppley

1 reference

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27 March 2020

author name string

Jessica A Bryant

2

1 reference

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27 March 2020

Torben Nielsen

5

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27 March 2020

publication date

14 August 2017

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27 March 2020

1 reference

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27 March 2020

volume

2

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27 March 2020

issue

10

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27 March 2020

page(s)

1367-1373

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https://scigraph.springernature.com/pub.10.1038/s41564-017-0008-3

27 March 2020

exact match

0 references

cites work

The nature and dynamics of bacterial genomes.

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Reductive genome evolution at both ends of the bacterial population size spectrum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

The origins of genome complexity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Independent genome reduction and phylogenetic reclassification of the oceanic SAR11 clade

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Community genomics among stratified microbial assemblages in the ocean's interior

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Comparative metagenomic analysis of a microbial community residing at a depth of 4,000 meters at station ALOHA in the North Pacific subtropical gyre

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Genomes of Abundant and Widespread Viruses from the Deep Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Wind and sunlight shape microbial diversity in surface waters of the North Pacific Subtropical Gyre

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Estimating the compensation irradiance in the ocean: The importance of accounting for non-photosynthetic uptake of inorganic carbon

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Metagenomic species profiling using universal phylogenetic marker genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Accurate and universal delineation of prokaryotic species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Implications of streamlining theory for microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Prochlorococcus: the structure and function of collective diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

The significance of nitrogen cost minimization in proteomes of marine microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Ocean plankton. Structure and function of the global ocean microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Genomics and evolution of heritable bacterial symbionts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Molecular evolution of protein atomic composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Prochlorococcus: advantages and limits of minimalism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

The Black Queen Hypothesis: evolution of dependencies through adaptive gene loss

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Prodigal: prokaryotic gene recognition and translation initiation site identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

CD-HIT: accelerated for clustering the next-generation sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

RefSeq microbial genomes database: new representation and annotation strategy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

KEGG: new perspectives on genomes, pathways, diseases and drugs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Adaptive seeds tame genomic sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Toward Automatic Reconstruction of a Highly Resolved Tree of Life

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

VSEARCH: a versatile open source tool for metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Who's your neighbor? New computational approaches for functional genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Search and clustering orders of magnitude faster than BLAST

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

riboFrame: An Improved Method for Microbial Taxonomy Profiling from Non-Targeted Metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Fast gapped-read alignment with Bowtie 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Fast and accurate short read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

SmashCommunity: a metagenomic annotation and analysis tool

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Microbial community transcriptional networks are conserved in three domains at ocean basin scales.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

WGCNA: an R package for weighted correlation network analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

A general framework for weighted gene co-expression network analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Biopython: freely available Python tools for computational molecular biology and bioinformatics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

The 'effective number of codons' used in a gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Comment on "The Origins of Genome Complexity"

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

Extreme genome reduction in symbiotic bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

7 January 2021

Nitrogen versus carbon use in prokaryotic genomes and proteomes

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

7 January 2021

Intimate evolution of proteins. Proteome atomic content correlates with genome base composition

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

7 January 2021

The human respiratory tract microbial community structures in healthy and cystic fibrosis infants

1 reference

https://api.crossref.org/works/10.1038%2FS41564-017-0008-3

7 January 2021

10.1038/S41564-017-0008-3

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28808230%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

27 March 2020

1091161792

0 references

Fatcat ID

release_js27ihlav5d4thrm5zbmkewqsy

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/js27ihlav5d4thrm5zbmkewqsy

24 November 2022

mapped directly with Wikidata item

1 reference