(Q46238590)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

title

Estimating and mitigating amplification bias in qualitative and quantitative arthropod metabarcoding (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

1 reference

1 reference

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

6

Rosemary G Gillespie

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

author name string

Henrik Krehenwinkel

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

Madeline Wolf

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

Andrew J Rominger

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

Warren B Simison

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

language of work or name

English

0 references

publication date

15 December 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

page(s)

17668

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

7 April 2020

copyright license

start time

1 December 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/s41598-017-17333-x

0 references

cites work

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24 May 2018

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Environmental Sequencing Provides Reasonable Estimates of the Relative Abundance of Specific Picoeukaryotes

24 May 2018

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Testing the potential of a ribosomal 16S marker for DNA metabarcoding of insects

24 May 2018

1 reference

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Mitochondrial metagenomics: letting the genes out of the bottle

24 May 2018

1 reference

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Quantitative DNA metabarcoding: improved estimates of species proportional biomass using correction factors derived from control material

24 May 2018

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24 May 2018

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Evaluating a multigene environmental DNA approach for biodiversity assessment

24 May 2018

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Eco-genomic analysis of the poleward range expansion of the wasp spider Argiope bruennichi shows rapid adaptation and genomic admixture

24 May 2018

1 reference

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Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass--Sequence Relationships with an Innovative Metabarcoding Protocol.

24 May 2018

1 reference

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Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding

24 May 2018

1 reference

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Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform

24 May 2018

1 reference

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DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity

24 May 2018

1 reference

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DNA barcodes for ecology, evolution, and conservation

24 May 2018

1 reference

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DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

24 May 2018

1 reference

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Accurate genome relative abundance estimation for closely related species in a metagenomic sample

24 May 2018

1 reference

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Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics

24 May 2018

1 reference

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Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias

24 May 2018

1 reference

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CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction.

24 May 2018

1 reference

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Cost-efficient high-throughput HLA typing by MiSeq amplicon sequencing

24 May 2018

1 reference

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PEAR: a fast and accurate Illumina Paired-End reAd mergeR.

24 May 2018

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Reliable, verifiable and efficient monitoring of biodiversity via metabarcoding

24 May 2018

1 reference

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A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents

24 May 2018

1 reference

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Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification.

24 May 2018

1 reference

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Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

24 May 2018

1 reference

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PCR primers for metazoan nuclear 18S and 28S ribosomal DNA sequences

24 May 2018

1 reference

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The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna

24 May 2018

1 reference

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Towards next-generation biodiversity assessment using DNA metabarcoding

24 May 2018

1 reference

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Next-generation sequencing technologies for environmental DNA research

24 May 2018

1 reference

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UCHIME improves sensitivity and speed of chimera detection

24 May 2018

1 reference

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Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

24 May 2018

1 reference

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Second-generation environmental sequencing unmasks marine metazoan biodiversity

24 May 2018

1 reference

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The ITS region as a target for characterization of fungal communities using emerging sequencing technologies

24 May 2018

1 reference

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24 May 2018

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Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts

24 May 2018

1 reference

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Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species

24 May 2018

1 reference

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Mitochondrial pseudogenes: evolution's misplaced witnesses

24 May 2018

1 reference

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Bias in template-to-product ratios in multitemplate PCR

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

Real time quantitative PCR

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

Counting target molecules by exponential polymerase chain reaction: copy number of mitochondrial DNA in rat tissues

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

The effect of primer-template mismatches on the detection and quantification of nucleic acids using the 5' nuclease assay

24 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5732254

Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring

15 August 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-17333-X

Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-17333-X

Testing whether ecological factors promote cladogenesis in a group of tiger beetles (Coleoptera: Cicindelidae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-17333-X

Histone H3 and U2 snRNA DNA sequences and arthropod molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-17333-X

$1 DNA barcodes for reconstructing complex phenomes and finding rare species in specimen-rich samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-17333-X

inferred from DOI database lookup

7 January 2021

based on heuristic

Maygen. n. (Araneae: Sparassidae): A Unique Lineage from Southern Africa Supported by Morphological and Molecular Features

1 reference

https://api.crossref.org/works/10.1038%2FS41598-017-17333-X

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41598-017-17333-X

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29247210%20AND%20SRC:MED&resulttype=core&format=json

7 April 2020

PubMed publication ID

29247210

1 reference