(Q51083423)

29 March 2018

title

NetTepi: an integrated method for the prediction of T cell epitopes. (English)

1 reference

29 March 2018

author

Morten Nielsen

series ordinal

2

1 reference

29 March 2018

Thomas Trolle

object named as

Thomas Trolle

series ordinal

1

0 references

language of work or name

English

0 references

publication date

27 May 2014

1 reference

29 March 2018

published in

Immunogenetics

1 reference

29 March 2018

volume

66

1 reference

29 March 2018

issue

7-8

1 reference

29 March 2018

page(s)

449-456

1 reference

29 March 2018

https://scigraph.springernature.com/pub.10.1007/s00251-014-0779-0

exact match

0 references

cites work

Development of high potency universal DR-restricted helper epitopes by modification of high affinity DR-blocking peptides.

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

A quantitative analysis of the variables affecting the repertoire of T cell specificities recognized after vaccinia virus infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Degenerate T-cell recognition of peptides on MHC molecules creates large holes in the T-cell repertoire

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Properties of MHC class I presented peptides that enhance immunogenicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Allele-specific motifs revealed by sequencing of self-peptides eluted from MHC molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Efficient MHC class I-peptide binding is required but does not ensure MHC class I-restricted immunogenicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Peptide-MHC class I stability is a better predictor than peptide affinity of CTL immunogenicity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

CD8+ T Cell Effector Mechanisms in Resistance to Infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

NetMHCpan, a method for MHC class I binding prediction beyond humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

How the T Cell Repertoire Becomes Peptide and MHC Specific

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

NetMHCstab - predicting stability of peptide-MHC-I complexes; impacts for cytotoxic T lymphocyte epitope discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

NetMHCcons: a consensus method for the major histocompatibility complex class I predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Prediction of proteasome cleavage motifs by neural networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Immune epitope database analysis resource

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

T cell cross-reactivity and conformational changes during TCR engagement

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Major histocompatibility complex class I binding predictions as a tool in epitope discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

The role of the proteasome in generating cytotoxic T-cell epitopes: insights obtained from improved predictions of proteasomal cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Identifying MHC class I epitopes by predicting the TAP transport efficiency of epitope precursors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Generating quantitative models describing the sequence specificity of biological processes with the stabilized matrix method

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

SYFPEITHI: database for MHC ligands and peptide motifs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

How TCRs bind MHCs, peptides, and coreceptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

NetCTLpan: pan-specific MHC class I pathway epitope predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Modeling the MHC class I pathway by combining predictions of proteasomal cleavage, TAP transport and MHC class I binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

POPISK: T-cell reactivity prediction using support vector machines and string kernels

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

The immunogenicity of a viral cytotoxic T cell epitope is controlled by its MHC-bound conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

The immune epitope database 2.0.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Comprehensive analysis of dengue virus-specific responses supports an HLA-linked protective role for CD8+ T cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00251-014-0779-0

10.1007/S00251-014-0779-0

21 January 2018

Identifiers

DOI

1 reference

29 March 2018

PubMed ID

24863339

1 reference

29 March 2018