(Q91877881)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

title

Splice-Junction-Based Mapping of Alternative Isoforms in the Human Proteome (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

author name string

Edward Lau

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Yu Han

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Damon R Williams

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Cody T Thomas

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Rajani Shrestha

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Joseph C Wu

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

Maggie P Y Lam

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

publication date

1 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

volume

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

page(s)

3751-3765.e5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

25 April 2020

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/6961840

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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23 February 2021

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Detection of proteome diversity resulted from alternative splicing is limited by trypsin cleavage specificity.

23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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Semi-supervised Learning Predicts Approximately One Third of the Alternative Splicing Isoforms as Functional Proteins

23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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Mechanisms and Regulation of Alternative Pre-mRNA Splicing

23 February 2021

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Phosphorylation of cardiac Myosin-binding protein-C is a critical mediator of diastolic function

23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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limma powers differential expression analyses for RNA-sequencing and microarray studies

23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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23 February 2021

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Modulation of allostery by protein intrinsic disorder

23 February 2021

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23 February 2021

1 reference

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

23 February 2021

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23 February 2021

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23 February 2021

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APPRIS: annotation of principal and alternative splice isoforms

23 February 2021

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23 February 2021

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23 February 2021

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Parallel reaction monitoring for high resolution and high mass accuracy quantitative, targeted proteomics

23 February 2021

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Tissue-specific alternative splicing remodels protein-protein interaction networks.

23 February 2021

1 reference

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Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks

23 February 2021

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RBM20, a gene for hereditary cardiomyopathy, regulates titin splicing

23 February 2021

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Truncations of titin causing dilated cardiomyopathy.

23 February 2021

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MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation

23 February 2021

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The utility of mass spectrometry-based proteomic data for validation of novel alternative splice forms reconstructed from RNA-Seq data: a preliminary assessment

23 February 2021

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A scaling normalization method for differential expression analysis of RNA-seq data

23 February 2021

1 reference

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Molecular and functional characterization of a novel cardiac-specific human tropomyosin isoform

23 February 2021

1 reference

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Integrating shotgun proteomics and mRNA expression data to improve protein identification

23 February 2021

1 reference

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High-throughput proteomics detection of novel splice isoforms in human platelets

23 February 2021

1 reference

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A compatible exon-exon junction database for the identification of exon skipping events using tandem mass spectrum data

23 February 2021

1 reference

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

23 February 2021

1 reference

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Alternative isoform regulation in human tissue transcriptomes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

Analysis and validation of proteomic data generated by tandem mass spectrometry

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

Novel gene and gene model detection using a whole genome open reading frame analysis in proteomics

23 February 2021

1 reference

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Variation in alternative splicing across human tissues

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

Human cytomegalovirus infection of tumor cells downregulates NCAM (CD56): a novel mechanism for virus-induced tumor invasiveness

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

Protein kinase A enhances, whereas glycogen synthase kinase-3 beta inhibits, the activity of the exon 2-encoded transactivator domain of heterogeneous nuclear ribonucleoprotein D in a hierarchical fashion

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

Cyclins and cyclin dependent kinases during cardiac development.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

Myocardial localization and isoforms of neural cell adhesion molecule (N-CAM) in the developing and transplanted human heart

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6961840

10.1016/J.CELREP.2019.11.026

23 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31825849%20AND%20SRC:MED&resulttype=core&format=json

25 April 2020

1 reference