(Q26767114)

1 July 2019

title

Precision autophagy directed by receptor regulators - emerging examples within the TRIM family (English)

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1 July 2019

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1

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1 July 2019

Vojo Deretic

series ordinal

3

object named as

Vojo Deretic

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1 July 2019

author name string

Michael Mandell

series ordinal

2

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1 July 2019

language of work or name

English

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publication date

15 February 2016

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1 July 2019

published in

Journal of Cell Science

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1 July 2019

volume

129

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1 July 2019

issue

5

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1 July 2019

page(s)

881-891

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1 July 2019

Induction of autophagy and inhibition of tumorigenesis by beclin 1

cites work

1 reference

12 December 2020

Distinct classes of phosphatidylinositol 3'-kinases are involved in signaling pathways that control macroautophagy in HT-29 cells

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12 December 2020

PML regulates p53 acetylation and premature senescence induced by oncogenic Ras

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12 December 2020

LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing

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12 December 2020

The tripartite motif family identifies cell compartments

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12 December 2020

Spring, a novel RING finger protein that regulates synaptic vesicle exocytosis

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12 December 2020

SS-56, a novel cellular target of autoantibody responses in Sjögren syndrome and systemic lupus erythematosus

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12 December 2020

GNIP, a novel protein that binds and activates glycogenin, the self-glucosylating initiator of glycogen biosynthesis

1 reference

12 December 2020

A method to identify p62’s UBA domain interacting proteins

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12 December 2020

The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys

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12 December 2020

Staf50 is a novel p53 target gene conferring reduced clonogenic growth of leukemic U-937 cells.

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12 December 2020

PML regulates p53 stability by sequestering Mdm2 to the nucleolus

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12 December 2020

Cytoplasmic PML function in TGF-beta signalling

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12 December 2020

The kinase domain of titin controls muscle gene expression and protein turnover

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12 December 2020

MDM2 interaction with nuclear corepressor KAP1 contributes to p53 inactivation

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12 December 2020

TRIM family proteins: retroviral restriction and antiviral defence

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12 December 2020

p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death

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12 December 2020

Insulin resistance syndrome in subjects with mutated RING finger protein TRIM37

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12 December 2020

Chromosomal translocation t(15;17) in human acute promyelocytic leukemia fuses RARα with a novel putative transcription factor, PML

1 reference

12 December 2020

The PML-RARα fusion mRNA generated by the t(15;17) translocation in acute promyelocytic leukemia encodes a functionally altered RAR

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12 December 2020

Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor

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12 December 2020

Type I interferon in systemic lupus erythematosus and other autoimmune diseases

1 reference

12 December 2020

A novel autoantibody to a 155-kd protein is associated with dermatomyositis

1 reference

12 December 2020

A pivotal role for endogenous TGF-beta-activated kinase-1 in the LKB1/AMP-activated protein kinase energy-sensor pathway

1 reference

12 December 2020

The SPRY domain of Pyrin, mutated in familial Mediterranean fever patients, interacts with inflammasome components and inhibits proIL-1beta processing

1 reference

12 December 2020

siRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy

1 reference

12 December 2020

Autophagy: basic principles and relevance to disease

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12 December 2020

Mitochondrial autophagy is an HIF-1-dependent adaptive metabolic response to hypoxia

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12 December 2020

PpAtg30 tags peroxisomes for turnover by selective autophagy.

1 reference

12 December 2020

Essential role for Nix in autophagic maturation of erythroid cells

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12 December 2020

Regulation of autophagy by cytoplasmic p53

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12 December 2020

Downregulation of the Spi-1/PU.1 oncogene induces the expression of TRIM10/HERF1, a key factor required for terminal erythroid cell differentiation and survival

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12 December 2020

JNK1-mediated phosphorylation of Bcl-2 regulates starvation-induced autophagy

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12 December 2020

The E3 ubiquitin ligase Ro52 negatively regulates IFN-beta production post-pathogen recognition by polyubiquitin-mediated degradation of IRF3

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12 December 2020

Genomic analysis of the TRIM family reveals two groups of genes with distinct evolutionary properties

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12 December 2020

Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum

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12 December 2020

The effects of p53 on whole organism longevity are mediated by autophagy

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12 December 2020

TRIM family proteins and their emerging roles in innate immunity

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12 December 2020

Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production

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12 December 2020

Eradication of acute promyelocytic leukemia-initiating cells through PML-RARA degradation

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12 December 2020

MG53 nucleates assembly of cell membrane repair machinery.

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12 December 2020

A role for NBR1 in autophagosomal degradation of ubiquitinated substrates

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12 December 2020

Human TRIM gene expression in response to interferons

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12 December 2020

Horror autoinflammaticus: the molecular pathophysiology of autoinflammatory disease (*)

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12 December 2020

Nix directly binds to GABARAP: a possible crosstalk between apoptosis and autophagy

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12 December 2020

Gene disruption study reveals a nonredundant role for TRIM21/Ro52 in NF-kappaB-dependent cytokine expression in fibroblasts

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12 December 2020

NBR1 and p62 as cargo receptors for selective autophagy of ubiquitinated targets

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12 December 2020

Trim24 targets endogenous p53 for degradation

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12 December 2020

Mitochondria-anchored receptor Atg32 mediates degradation of mitochondria via selective autophagy

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12 December 2020

Atg32 is a mitochondrial protein that confers selectivity during mitophagy

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12 December 2020

Loss of the lupus autoantigen Ro52/Trim21 induces tissue inflammation and systemic autoimmunity by disregulating the IL-23-Th17 pathway

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12 December 2020

Human IgG antibody profiles differentiate between symptomatic patients with and without colorectal cancer.

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12 December 2020

Nix is a selective autophagy receptor for mitochondrial clearance

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12 December 2020

Nucleocytoplasmic shuttling of p62/SQSTM1 and its role in recruitment of nuclear polyubiquitinated proteins to promyelocytic leukemia bodies.

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12 December 2020

p62/SQSTM1 and ALFY interact to facilitate the formation of p62 bodies/ALIS and their degradation by autophagy

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12 December 2020

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12 December 2020

p62/sequestosome-1 associates with and sustains the expression of retroviral restriction factor TRIM5alpha

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12 December 2020

The ATDC (TRIM29) protein binds p53 and antagonizes p53-mediated functions

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12 December 2020

The selective macroautophagic degradation of aggregated proteins requires the PI3P-binding protein Alfy

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12 December 2020

Identification of BERP (brain-expressed RING finger protein) as a p53 target gene that modulates seizure susceptibility through interacting with GABA(A) receptors

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12 December 2020

Network organization of the human autophagy system

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12 December 2020

Autophagy contributes to therapy-induced degradation of the PML/RARA oncoprotein

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12 December 2020

Downregulation of active IKK beta by Ro52-mediated autophagy

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12 December 2020

Characterization of autophagosome formation site by a hierarchical analysis of mammalian Atg proteins

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12 December 2020

Genome-wide analysis reveals mechanisms modulating autophagy in normal brain aging and in Alzheimer's disease.

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12 December 2020

Self protection from anti-viral responses--Ro52 promotes degradation of the transcription factor IRF7 downstream of the viral Toll-Like receptors

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12 December 2020

Autoantibodies to GW bodies and other autoantigens in primary biliary cirrhosis

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12 December 2020

Human IRGM regulates autophagy and cell-autonomous immunity functions through mitochondria

1 reference

12 December 2020

A role for mitochondria in NLRP3 inflammasome activation

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12 December 2020

Autophagy and metabolism

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12 December 2020

Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome

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12 December 2020

Fas-associated death domain (FADD) and the E3 ubiquitin-protein ligase TRIM21 interact to negatively regulate virus-induced interferon production

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12 December 2020

Developmental regulation of MURF ubiquitin ligases and autophagy proteins nbr1, p62/SQSTM1 and LC3 during cardiac myofibril assembly and turnover.

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12 December 2020

Hexagonal assembly of a restricting TRIM5alpha protein

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12 December 2020

Autophagy regulates myeloid cell differentiation by p62/SQSTM1-mediated degradation of PML-RARα oncoprotein

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12 December 2020

Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy

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12 December 2020

RalB and the exocyst mediate the cellular starvation response by direct activation of autophagosome assembly

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12 December 2020

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1

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12 December 2020

Ret finger protein 2 enhances ionizing radiation-induced apoptosis via degradation of AKT and MDM2

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12 December 2020

LC3 and GATE-16 N termini mediate membrane fusion processes required for autophagosome biogenesis

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12 December 2020

TRIM5 is an innate immune sensor for the retrovirus capsid lattice

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12 December 2020

Gain-of-function Pyrin mutations induce NLRP3 protein-independent interleukin-1β activation and severe autoinflammation in mice

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12 December 2020

TFEB links autophagy to lysosomal biogenesis

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12 December 2020

Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth

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12 December 2020

Origin and evolution of TRIM proteins: new insights from the complete TRIM repertoire of zebrafish and pufferfish

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12 December 2020

The role of Atg proteins in autophagosome formation

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12 December 2020

Regulation of innate immune signalling pathways by the tripartite motif (TRIM) family proteins

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12 December 2020

Antiviral TRIMs: friend or foe in autoimmune and autoinflammatory disease?

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12 December 2020

Starch-binding domain-containing protein 1 (Stbd1) and glycogen metabolism: Identification of the Atg8 family interacting motif (AIM) in Stbd1 required for interaction with GABARAPL1

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12 December 2020

Asthma-predictive genetic markers in gene expression profiling of peripheral blood mononuclear cells

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12 December 2020

TGFβ-activated kinase 1 (TAK1)-binding proteins (TAB) 2 and 3 negatively regulate autophagy

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12 December 2020

TRIM proteins and cancer.

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12 December 2020

Myositis-specific anti-155/140 autoantibodies target transcription intermediary factor 1 family proteins

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12 December 2020

Toward an understanding of the protein interaction network of the human liver

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12 December 2020

Image-based genome-wide siRNA screen identifies selective autophagy factors

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12 December 2020

Inhibition of autophagy by TAB2 and TAB3

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12 December 2020

Tripartite motif 8 (TRIM8) modulates TNFα- and IL-1β-triggered NF-κB activation by targeting TAK1 for K63-linked polyubiquitination

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12 December 2020

TRIM13 regulates ER stress induced autophagy and clonogenic ability of the cells

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12 December 2020

Galectin 8 targets damaged vesicles for autophagy to defend cells against bacterial invasion

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12 December 2020

TRIM8 modulates p53 activity to dictate cell cycle arrest.

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12 December 2020

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells

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12 December 2020

A reverse-ELISA for the detection of TRIM28/KAP1 serum autoantibodies in colorectal cancer patients

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12 December 2020

Activation of autophagy by inflammatory signals limits IL-1β production by targeting ubiquitinated inflammasomes for destruction

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12 December 2020

TRIM6 interacts with Myc and maintains the pluripotency of mouse embryonic stem cells

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12 December 2020

Genome-wide siRNA screen reveals amino acid starvation-induced autophagy requires SCOC and WAC

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12 December 2020

The autophagy regulator Rubicon is a feedback inhibitor of CARD9-mediated host innate immunity

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12 December 2020

Autoantibodies to transcription intermediary factor TIF1β associated with dermatomyositis.

1 reference

12 December 2020

TRIM16 acts as an E3 ubiquitin ligase and can heterodimerize with other TRIM family members

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12 December 2020

Pex3-anchored Atg36 tags peroxisomes for degradation in Saccharomyces cerevisiae

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12 December 2020

The E3-ubiquitin ligase TRIM50 interacts with HDAC6 and p62, and promotes the sequestration and clearance of ubiquitinated proteins into the aggresome

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12 December 2020

Autophagy modulation as a potential therapeutic target for diverse diseases

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12 December 2020

Modulation of serines 17 and 24 in the LC3-interacting region of Bnip3 determines pro-survival mitophagy versus apoptosis

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12 December 2020

TBK1 kinase addiction in lung cancer cells is mediated via autophagy of Tax1bp1/Ndp52 and non-canonical NF-κB signalling

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12 December 2020

TRIM39 regulates cell cycle progression and DNA damage responses via stabilizing p21.

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12 December 2020

Ubiquitylation of p53 by the APC/C inhibitor Trim39.

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12 December 2020

The hairpin-type tail-anchored SNARE syntaxin 17 targets to autophagosomes for fusion with endosomes/lysosomes

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12 December 2020

NBR1 acts as an autophagy receptor for peroxisomes

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12 December 2020

Interaction between FIP200 and ATG16L1 distinguishes ULK1 complex-dependent and -independent autophagy.

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12 December 2020

Genome-wide association analyses identify 18 new loci associated with serum urate concentrations

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12 December 2020

Differential regulation of distinct Vps34 complexes by AMPK in nutrient stress and autophagy

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12 December 2020

The E3 ubiquitin ligase midline 1 promotes allergen and rhinovirus-induced asthma by inhibiting protein phosphatase 2A activity.

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12 December 2020

Central role of E3 ubiquitin ligase MG53 in insulin resistance and metabolic disorders

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12 December 2020

FIP200 regulates targeting of Atg16L1 to the isolation membrane

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12 December 2020

A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome

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12 December 2020

The E3-ligase TRIM family of proteins regulates signaling pathways triggered by innate immune pattern-recognition receptors

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12 December 2020

Transcriptional specificity in various p53-mutant cells

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12 December 2020

A KRAB/KAP1-miRNA cascade regulates erythropoiesis through stage-specific control of mitophagy.

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12 December 2020

mTOR inhibits autophagy by controlling ULK1 ubiquitylation, self-association and function through AMBRA1 and TRAF6.

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12 December 2020

Acetylated hsp70 and KAP1-mediated Vps34 SUMOylation is required for autophagosome creation in autophagy

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12 December 2020

ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase.

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12 December 2020

The LIR motif - crucial for selective autophagy

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12 December 2020

Autophagy sequesters damaged lysosomes to control lysosomal biogenesis and kidney injury

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12 December 2020

Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells

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12 December 2020

Autophagy in infection, inflammation, and immunity

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12 December 2020

Recruitment of the autophagic machinery to endosomes during infection is mediated by ubiquitin.

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12 December 2020

MURF2B, a novel LC3-binding protein, participates with MURF2A in the switch between autophagy and ubiquitin proteasome system during differentiation of C2C12 muscle cells

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12 December 2020

Role of autophagy, SQSTM1, SH3GLB1, and TRIM63 in the turnover of nicotinic acetylcholine receptors

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12 December 2020

Role of autophagy in glycogen breakdown and its relevance to chloroquine myopathy

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12 December 2020

Discovery and saturation analysis of cancer genes across 21 tumour types

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12 December 2020

Nucleotide biosynthetic enzyme GMP synthase is a TRIM21-controlled relay of p53 stabilization

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12 December 2020

Interactions between autophagy receptors and ubiquitin-like proteins form the molecular basis for selective autophagy.

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12 December 2020

Quantitative proteomics identifies NCOA4 as the cargo receptor mediating ferritinophagy

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12 December 2020

Self and nonself: how autophagy targets mitochondria and bacteria

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12 December 2020

Hepatitis C virus triggers mitochondrial fission and attenuates apoptosis to promote viral persistence

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12 December 2020

Ubiquitin is phosphorylated by PINK1 to activate parkin

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12 December 2020

Cargo recognition and trafficking in selective autophagy

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12 December 2020

Antibody- and TRIM21-dependent intracellular restriction of Salmonella enterica.

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12 December 2020

WIPI2 links LC3 conjugation with PI3P, autophagosome formation, and pathogen clearance by recruiting Atg12-5-16L1.

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12 December 2020

Sestrin2 promotes Unc-51-like kinase 1 mediated phosphorylation of p62/sequestosome-1

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12 December 2020

Autophagic clearance of polyQ proteins mediated by ubiquitin-Atg8 adaptors of the conserved CUET protein family

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12 December 2020

TRIM59 is up-regulated in gastric tumors, promoting ubiquitination and degradation of p53.

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12 December 2020

TRIpartite motif 21 (TRIM21) differentially regulates the stability of interferon regulatory factor 5 (IRF5) isoforms

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12 December 2020

TRIM proteins regulate autophagy and can target autophagic substrates by direct recognition

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12 December 2020

E3 ubiquitin ligase TRIM32 negatively regulates tumor suppressor p53 to promote tumorigenesis

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12 December 2020

Selective VPS34 inhibitor blocks autophagy and uncovers a role for NCOA4 in ferritin degradation and iron homeostasis in vivo

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12 December 2020

Anchored multiplex PCR for targeted next-generation sequencing.

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12 December 2020

Microtubule-associated protein 1 light chain 3 interacts with and contributes to growth inhibiting effect of PML.

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12 December 2020

Metabolic control of autophagy

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12 December 2020

PI(5)P regulates autophagosome biogenesis

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12 December 2020

Deacetylation of nuclear LC3 drives autophagy initiation under starvation

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12 December 2020

Immunologic manifestations of autophagy

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12 December 2020

Degradation of AMPK by a cancer-specific ubiquitin ligase

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12 December 2020

TRIM25 has a dual function in the p53/Mdm2 circuit

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12 December 2020

Polyubiquitin chain-dependent protein degradation in TRIM30 cytoplasmic bodies

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12 December 2020

IRGM Governs the Core Autophagy Machinery to Conduct Antimicrobial Defense

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12 December 2020

TBK1 controls autophagosomal engulfment of polyubiquitinated mitochondria through p62/SQSTM1 phosphorylation

1 reference

12 December 2020

Autophagic Degradation of the 26S Proteasome Is Mediated by the Dual ATG8/Ubiquitin Receptor RPN10 in Arabidopsis

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12 December 2020

Activating MET kinase rearrangements in melanoma and Spitz tumours

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12 December 2020

Receptor-mediated selective autophagy degrades the endoplasmic reticulum and the nucleus

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12 December 2020

Regulation of endoplasmic reticulum turnover by selective autophagy

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12 December 2020

Bcl-2-like protein 13 is a mammalian Atg32 homologue that mediates mitophagy and mitochondrial fragmentation

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12 December 2020

Transcriptional control of autophagy-lysosome function drives pancreatic cancer metabolism

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12 December 2020

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy

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12 December 2020

TRIM-mediated precision autophagy targets cytoplasmic regulators of innate immunity

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12 December 2020

Ubiquitin Ligase TRIM62 Regulates CARD9-Mediated Anti-fungal Immunity and Intestinal Inflammation

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12 December 2020

Autophagy mediates degradation of nuclear lamina

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12 December 2020

PML/TRIM19-Dependent Inhibition of Retroviral Reverse-Transcription by Daxx

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12 December 2020

The N-terminal part of TIF1, a putative mediator of the ligand-dependent activation function (AF-2) of nuclear receptors, is fused to B-raf in the oncogenic protein T18

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12 December 2020

Nucleotide sequence analysis of a candidate gene for ataxia-telangiectasia group D (ATDC)

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12 December 2020

The acute promyelocytic leukemia-specific PML-RAR alpha fusion protein inhibits differentiation and promotes survival of myeloid precursor cells

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12 December 2020

A RING finger motif regulates transforming activity of the rfp/ret fusion gene

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12 December 2020

Involvement of the rfp tripartite motif in protein-protein interactions and subcellular distribution

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12 December 2020

A candidate gene for familial Mediterranean fever

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12 December 2020

Ancient Missense Mutations in a New Member of the RoRet Gene Family Are Likely to Cause Familial Mediterranean Fever

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12 December 2020

Role of PML in cell growth and the retinoic acid pathway

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12 December 2020

Identification of genes differentially regulated by interferon alpha, beta, or gamma using oligonucleotide arrays

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12 December 2020

Identifiers

DOI

10.1242/JCS.163758

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1 July 2019

OpenCitations bibliographic resource ID

2957980

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

1 July 2019

PubMed ID

26906420

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1 July 2019