(Q33573686)

28 July 2017

title

CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells (English)

1 reference

28 July 2017

Seung Woo Cho

3

0 references

Daniel A Lim

object named as

Daniel A Lim

17

0 references

Jonathan Weissman

16

object named as

Jonathan S Weissman

1 reference

28 July 2017

7

Frank J Attenello

1 reference

28 July 2017

S John Liu

1

1 reference

28 July 2017

Max A Horlbeck

2

1 reference

28 July 2017

Harjus S Birk

4

1 reference

28 July 2017

Martina Malatesta

5

1 reference

28 July 2017

Daniel He

6

1 reference

28 July 2017

Jacqueline E Villalta

8

1 reference

28 July 2017

Min Y Cho

9

1 reference

28 July 2017

Yuwen Chen

10

1 reference

28 July 2017

Mohammad A Mandegar

11

1 reference

28 July 2017

Michael P Olvera

12

1 reference

28 July 2017

Luke A Gilbert

13

1 reference

28 July 2017

Bruce R Conklin

14

1 reference

28 July 2017

Howard Y Chang

15

1 reference

28 July 2017

language of work or name

English

0 references

publication date

15 December 2016

1 reference

28 July 2017

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28 July 2017

volume

355

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28 July 2017

issue

6320

1 reference

Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR-Cas9 library

28 July 2017

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21 June 2018

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In Vivo Characterization of Linc-p21 Reveals Functional cis-Regulatory DNA Elements

21 June 2018

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21 June 2018

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Integrated Genomic Analysis of Diverse Induced Pluripotent Stem Cells from the Progenitor Cell Biology Consortium

21 June 2018

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21 June 2018

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Unlinking an lncRNA from Its Associated cis Element

21 June 2018

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CRISPR Interference Efficiently Induces Specific and Reversible Gene Silencing in Human iPSCs

21 June 2018

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Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs

21 June 2018

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21 June 2018

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Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution

21 June 2018

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High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities.

21 June 2018

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Highly specific epigenome editing by CRISPR-Cas9 repressors for silencing of distal regulatory elements

21 June 2018

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DECKO: Single-oligo, dual-CRISPR deletion of genomic elements including long non-coding RNAs

21 June 2018

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Identification and characterization of essential genes in the human genome.

21 June 2018

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Comprehensive Genomic Characterization of Long Non-coding RNAs across Human Cancers.

21 June 2018

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Crystal Structure of Staphylococcus aureus Cas9

21 June 2018

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Discovery of cancer drug targets by CRISPR-Cas9 screening of protein domains

21 June 2018

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Opposing Roles for the lncRNA Haunt and Its Genomic Locus in Regulating HOXA Gene Activation during Embryonic Stem Cell Differentiation

21 June 2018

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The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells

21 June 2018

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HISAT: a fast spliced aligner with low memory requirements

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

The landscape of long noncoding RNAs in the human transcriptome

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Targeting non-coding RNAs with the CRISPR/Cas9 system in human cell lines

21 June 2018

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Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation

21 June 2018

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Considerations when investigating lncRNA function in vivo.

21 June 2018

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PVT1 dependence in cancer with MYC copy-number increase.

21 June 2018

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Measuring error rates in genomic perturbation screens: gold standards for human functional genomics

21 June 2018

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A promoter-level mammalian expression atlas

21 June 2018

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An atlas of active enhancers across human cell types and tissues

21 June 2018

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An evolutionarily conserved long noncoding RNA TUNA controls pluripotency and neural lineage commitment

21 June 2018

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The evolution of lncRNA repertoires and expression patterns in tetrapods

21 June 2018

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Multiple knockout mouse models reveal lincRNAs are required for life and brain development

21 June 2018

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Genome-scale CRISPR-Cas9 knockout screening in human cells

21 June 2018

1 reference

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Genetic screens in human cells using the CRISPR-Cas9 system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Super-enhancers in the control of cell identity and disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

A robust method to derive functional neural crest cells from human pluripotent stem cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

lincRNAs: genomics, evolution, and mechanisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Integrated platform for genome-wide screening and construction of high-density genetic interaction maps in mammalian cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Gene regulation by the act of long non-coding RNA transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Control of somatic tissue differentiation by the long non-coding RNA TINCR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Landscape of transcription in human cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Genome regulation by long noncoding RNAs.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Fast gapped-read alignment with Bowtie 2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Using ChIP-seq technology to generate high-resolution profiles of histone modifications

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

lincRNAs act in the circuitry controlling pluripotency and differentiation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Differential expression analysis for sequence count data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Long noncoding RNAs with enhancer-like function in human cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Evolution and functions of long noncoding RNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

VISTA Enhancer Browser--a database of tissue-specific human enhancers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

The ENCODE (ENCyclopedia Of DNA Elements) Project

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

RNA interference in human cells is restricted to the cytoplasm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

The roX genes encode redundant male-specific lethal transcripts required for targeting of the MSL complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5394926

Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1126%2FSCIENCE.AAH7111

21 January 2018

Identifiers

DOI

10.1126/SCIENCE.AAH7111

1 reference

28 July 2017

1 reference

28 July 2017

1 reference